Pairwise Alignments

Query, 264 a.a., Hydroxymethylpyrimidine ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 282 a.a., ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  204 bits (518), Expect = 2e-57
 Identities = 103/234 (44%), Positives = 149/234 (63%), Gaps = 5/234 (2%)

Query: 33  AIKSLDLDVAQGEFLTLLGPSGCGKSTFLRVVADLLQPSRGHI-----EVLSSTPQAARK 87
           A+  + L + +GEF++LLGPSGCGKST L++ A L QPS GH+     +   +   A   
Sbjct: 41  ALSRVKLAIERGEFVSLLGPSGCGKSTLLKMFAGLEQPSAGHVRWWGKDAPGTDHHAGTP 100

Query: 88  NRDIGFVFQDAALLPWRTALQNVELPLQVGGGASRKGRRSPRELLELVGLKDRLNAFPHE 147
            R +  VFQ+A L+PW     NV LPL + G    + +   +  LELVGL    + +P E
Sbjct: 101 GRSLAMVFQEATLMPWAKVHDNVRLPLDLAGAPKAQSQLKVQAALELVGLGKFGDVYPRE 160

Query: 148 MSGGQRQRVSIARALASDPKILLMDEPFGALDEITRDRLNEEILRVWRETGVTILFVTHS 207
           +SGG + R SIARALA++P +LLMDEPFGALDE TR++L+ ++ ++W +  +T++FVTHS
Sbjct: 161 LSGGMQMRASIARALATEPNLLLMDEPFGALDEFTRNKLDSDLRQLWLKRDLTVVFVTHS 220

Query: 208 IHEAAFLGQRVLMLAANPGRVREIVPVELPAERTLEVRETPEFVRLTSHLRRVL 261
           I EA +L  RV+++ A PGRV   V ++ P ER    R +P F+   +HL R+L
Sbjct: 221 IFEAVYLSSRVIVMGARPGRVIADVIIDGPLERDEAYRTSPAFIEQCAHLSRLL 274