Pairwise Alignments

Query, 287 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score = 84.0 bits (206), Expect = 3e-21
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 2/245 (0%)

Query: 41  RRVLPALGIVGLILLWWAVIVVFGVKPFIAPTPWAVLET--LYAKRDVLLDNLLPTAFEA 98
           +R+ P    V L+ +W   +    +   I P P AV+       +   +  +L  + + A
Sbjct: 11  QRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTHLAISGWRA 70

Query: 99  AGGFVLGNLAAIVIATIFVHNKTLQDIFFPVVLMFNAVPLVAKAPVLVLIMGNGVEPKIT 158
             GFV+G    +V+  I   +   + +    V M   VP +A  P+++L  G     KI 
Sbjct: 71  GLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFGIDESAKIF 130

Query: 159 IAALVCFFPTLVNMVRGLESVNPQAMELMRVLSASKTEIFFRLRLLNALPYLFSALRIAA 218
           + AL   FP  +N   G+ +V+P  +E+ R    S   +F ++ L  ALP +   +R A 
Sbjct: 131 LVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSILVGVRFAL 190

Query: 219 SMCVIGAVVGEWVGATVGIGAMILQATFNFDSPLLYAAIVMSATLSGLFFLLVALAEKLV 278
               +  +V E + A  GIG + + A     + ++  AIV+ A L  +  L     E++ 
Sbjct: 191 GFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLAARGLERVW 250

Query: 279 IRWQP 283
           +RW P
Sbjct: 251 LRWHP 255