Pairwise Alignments

Query, 385 a.a., Domain of unknown function / Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 910 a.a., putative ABC transporter ATP-binding protein YbhF from Alteromonas macleodii MIT1002

 Score = 68.9 bits (167), Expect = 5e-16
 Identities = 86/388 (22%), Positives = 164/388 (42%), Gaps = 28/388 (7%)

Query: 2   LLALIRKELLALVRDMHGLAALFVMPMVFIVLMSLTLKDIYRPPLAELTYAIDMRD-TAT 60
           LL+   +E L L+RD   L   F+  MV +V++   +       + +L+YA+  RD T+T
Sbjct: 543 LLSYASRETLELIRDPIRLTMSFLGSMVLMVVIGYGIT----MDVDDLSYAVFDRDQTST 598

Query: 61  PAQWLKQLWQRNHGAPQPLGD---DWQARLRNGSLKYVIVMEQGLSEELESAALSTQARV 117
              +   L    +   QP+     D   R+++G L   + +    S++L           
Sbjct: 599 SLNYRNALSGSRYFNEQPVITSYADMDRRMKSGELSLAVEIPPEFSQKL----------- 647

Query: 118 HLLTEPGIDANLFNALRAELVGASGELKARLALAVPGTAGPAPDASIQAMVRAERFSTAG 177
           H   +  I A +  A+ +      G +       +   A  A      + +  E      
Sbjct: 648 HKGEQVEIGAWIDGAMPSRAETIQGYVTGIHLKWLLQQASQASQVQSTSSINVESRYLYN 707

Query: 178 PRPTSVQQNVPAWLVFGMFFVVASLSSL-FVQERSSGALGRLQSLGVSRFTLLASKALPY 236
           P   S+   VPA +   +  + A L+SL  V+E+  G++  L    V+R   L  K LPY
Sbjct: 708 PDVRSLVAIVPAVMPMLLLMIPALLTSLAVVREKELGSIINLYVTPVTRIEFLLGKQLPY 767

Query: 237 LGVNALQAVLMIAAGIWFMPL-IGGDALSLAGIHWGALLLSLAAVSLAAVSLSLALACLV 295
           +  + +  +L++A  +W   + + GD + L  I    +  S +   LA+V  +  +A ++
Sbjct: 768 IATSFVSFLLLVAMAVWLFNIPLKGDVIVLCLITLLFVTFSTSFGLLASVFTNSQIAAIL 827

Query: 296 RSHAQAATIGPMVNVLMAAAGGIMVPKFVMPGFMQRLVEISPMNWGLEALLTVLLRGGGV 355
                  TIG MV  +  A  G++ P   + G  + + E+ P+++ L A   +  +G G 
Sbjct: 828 -----LTTIGTMVPAIQFA--GMITPVSALEGAGRVIGELHPISYFLTASRGIFSKGLGF 880

Query: 356 ADALPQIGRLVVFAALMFFIAVFLFRRR 383
                 +  + +   +  ++A  L R++
Sbjct: 881 ETLDFAVFAIAISIPITLWLATVLLRKQ 908