Pairwise Alignments

Query, 1028 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1008 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  980 bits (2533), Expect = 0.0
 Identities = 508/1008 (50%), Positives = 699/1008 (69%), Gaps = 5/1008 (0%)

Query: 1    MNFTDIFIRRPVLAMVVSLLIVVLGLRALAGLPVNQYPKTENGVVTITTAYYGADAATVA 60
            M FTD+FIRRPVLAMVVSLLIV+LG +A + LP+ QYP  EN ++T+TTAY GA+A T+ 
Sbjct: 1    MKFTDVFIRRPVLAMVVSLLIVLLGFQAYSTLPLRQYPSMENALITVTTAYPGANAETIQ 60

Query: 61   GFITQPLEAAVSQAQGIDYLSSSSSLGVSTITATLRLNYDSNRALTEINTQVNSVRNQLP 120
            G+ITQPL+ +++ A+GIDY++S S    S I+   R+  +S+R  TE+  + N V+N+LP
Sbjct: 61   GYITQPLQQSLASAEGIDYMTSVSRQNFSVISIYARIGSNSDRLFTELLAKANEVKNKLP 120

Query: 121  PQAQQPVLTVATGQTTDAMYIGFYSDTLPNNNVTDFLVRVVQPKLNAIPGVQTAEILGAR 180
              A+ PVL+      +  MYI F S  L N  +TD+L RV+QPKL  +PG+  AEILG +
Sbjct: 121  QDAEDPVLSKEAADASALMYISFSSGQLSNPQITDYLSRVIQPKLATLPGMAEAEILGNQ 180

Query: 181  TFALRAWLDAQKMAAFGVTATDVSAALAANNYLAAVGQSKGQMVSVPLTAGTSLHSVDEF 240
             FA+R WLD  K+A FG++A+D++ A+   N+L+A G+ KG+ V   + A T L S + F
Sbjct: 181  VFAMRIWLDPVKLAGFGLSASDITDAVRRYNFLSAAGEVKGEFVVTSINANTDLKSAEAF 240

Query: 241  KQLSIKSSNGAIVRLQDVANVTLGSENYDFNVAFNGVRSVFIGIKVAPEANILDVAKQVR 300
              +S+K+   + V L+DVA V +G+ENY+   +F G  SV+IGIK  P AN LDV K+VR
Sbjct: 241  GAISVKTDGDSRVLLRDVARVEMGAENYNAISSFGGTPSVYIGIKATPSANPLDVIKEVR 300

Query: 301  TTFPDLQSQLPSGLTGKIVYDSTDFINTSISEVIKTLVEALVIVTVVIYLFLGSFRAVVV 360
               P+L+SQLP  L  +I YD+T FI  SI+EV+KTL EA++IV VV++LFLG+ R+VV+
Sbjct: 301  KILPELESQLPPNLKAEIAYDATLFIQASINEVVKTLFEAVLIVIVVVFLFLGALRSVVI 360

Query: 361  PVIAMPLSLIGTFFIMLVLGYSINLLTLLALVLAIGLVVDDAIIVVENVDRHMREGKSPM 420
            PVI +PLS+IG  F M ++GYSINLLTLLA+VLAIGLVVDDAI+VVEN+ RH+ EGK+P+
Sbjct: 361  PVITIPLSMIGVLFFMQLMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKTPL 420

Query: 421  QASLLAARELGGPILAMTVVLVAVYVPIGFQGGLTGSLFTEFAFTLAGSVVVSGIVALTL 480
             A+L  ARE+  P+++MT+ L AVY PIGF  GLTG+LF EFA TLAG+V++SGIVALTL
Sbjct: 421  DAALEGAREIALPVVSMTITLAAVYAPIGFLEGLTGALFKEFALTLAGAVIISGIVALTL 480

Query: 481  SPMMCSRFFKPEQDTGKFATFIEHTFERVHRRYQLILRSVLKTWPVMIVMGVILVALLFV 540
            SPMMC+   + +++    A  ++  F+ + RRYQ +L   L T PV+IV  +I++ L+ V
Sbjct: 481  SPMMCALLLRHDENPSGLAHRLDRMFDGLKRRYQRMLHGTLNTRPVVIVFALIVLCLIPV 540

Query: 541  MFKMSKSELAPEEDQGIVLSQVVGAPTAT-INQIQTYADQIFQIAHDTPEYAQLFQLTGV 599
              K ++S+LAP+EDQGI+   +  AP  T +  + TY D+   I    PEY   FQ+ G 
Sbjct: 541  FLKFTQSQLAPDEDQGIIF-MIASAPQPTNLEYLNTYTDEFINIFKAFPEYYSSFQINGF 599

Query: 600  PSTNAGIAGVLLKPWDQRTRSAHDIQTDLQKRWNGIAGAKVVAFQFPALPG-ASGLPVQF 658
                +GI G LLKPW++R R+   I  ++QKR   I G +V  F  P+LPG   GLP  F
Sbjct: 600  NGVQSGIGGFLLKPWNERDRTQMQILPEVQKRLEQIPGLQVFGFNLPSLPGTGEGLPFGF 659

Query: 659  VIKTTEPFENLNTLAQQVMDKARADGKFYYIDADLKIDLPQATVVVDRDKIATLGITQQD 718
            VI T   +E+L  +A +V  +A   GKF ++D DL  D P+  V +DR K A +G++ QD
Sbjct: 660  VINTANDYESLLEVANRVKKRAMESGKFAFVDIDLAFDKPEVVVDIDRAKAAQMGVSMQD 719

Query: 719  VGNAMGAALGGGYVNYFSIAGRSYKVIPQVQQVDRLNPSDVLNFYIKTPNG-VVPASTVA 777
            +G  +   L    +N F++ GRSYKVI QV++  R NP  + N+Y+K   G V+P ST+ 
Sbjct: 720  LGGTLATLLAEAEINRFTLDGRSYKVIAQVERTYRDNPEWLNNYYVKNAQGEVLPLSTLI 779

Query: 778  SLKYSVQPETVNHFQQLNSVTIQGVPSGTQGETLEYLRGVVQQLAPSGYSVDYSGQSRQF 837
            ++    +P  +N FQQLNS  I G P  + GE ++ +R +  +  P GY+ DYSG SRQF
Sbjct: 780  TVTDRARPRQLNQFQQLNSALISGFPIVSMGEAIDTVRQIAIEETPPGYAFDYSGASRQF 839

Query: 838  VQESGNFAITFVFALIIVFLALSAQFESFRDPVVILVSVPLALFGAMIFIFWGFASMNIY 897
            +QE      TF  AL I+FL L+AQFESFRDP+VILV+VPL++ GA+I +F G++SMNIY
Sbjct: 840  IQEGTALWATFGLALAIIFLVLAAQFESFRDPLVILVTVPLSICGALIPLFLGWSSMNIY 899

Query: 898  TQVGLVTLMGLISKHGILIVEVANRLQK-QGLSKLDAIVEAAGTRLRPILMTTAAMVFGV 956
            TQVGLVTL+GLISKHGILIVE AN+L+K +GL+   A+ EAA  RLRP+LMTTAAMVFG+
Sbjct: 900  TQVGLVTLIGLISKHGILIVEFANQLRKDKGLTPRQAVEEAAAIRLRPVLMTTAAMVFGM 959

Query: 957  LPLVIASGAGAAGRKAMGIVIFSGLSIGTLFTLFVVPAMYLAIAARHK 1004
            +PL++A+GAGA  R  +G+VI +G+SIGTLFTLFV+P +Y  +A   K
Sbjct: 960  VPLILATGAGAVSRFDIGMVIATGMSIGTLFTLFVLPCVYTLLAKPDK 1007