Pairwise Alignments

Query, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  436 bits (1122), Expect = e-126
 Identities = 253/602 (42%), Positives = 357/602 (59%), Gaps = 19/602 (3%)

Query: 1   MSYTAPIKDMLFDIEHLANIGEIAKLPGFEDAGLETAQAVLEECARFNQDVIAPLNIEGD 60
           M+Y AP++DM F +  L ++    +  G E    +T   +LEE ARF   +IAPLN   D
Sbjct: 1   MNYQAPLRDMRFVLHELFDLSGHCQQLGIE-LDRDTLDGILEEAARFTGQIIAPLNRNSD 59

Query: 61  RNPSSFKNGAVTTTPGFKDAFAQYVAGGWQGLQHPSDFGGQGLPKTIGAACGEMLNSANM 120
                +  G VTT  G +DA+ QYV  GW  +  P  +GGQGLP+   A+  EML +A++
Sbjct: 60  EQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAASL 119

Query: 121 SFALCPLLSDGAIEALLTAGSDELKAVYLEKLVSGQWTGTMNLTEPQAGSDLAMVRSRAE 180
           SF +   L++GA+ AL   GS+ LK  YL ++VSG+W GTM LTEPQAG+DLA++R+RA+
Sbjct: 120 SFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRAQ 179

Query: 181 PQPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNKDGS 240
           P+ DG+Y++ G+KIFI+ GE D+ +NIVHLVLAR+  AP GV+GISLF+VPK L      
Sbjct: 180 PEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG---- 235

Query: 241 LGERNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNSARYAV 300
            GERN + C ++EHKMGIK + T V+ +    GA G+LVG+ N+GL  MF MMN AR+ V
Sbjct: 236 -GERNALGCGALEHKMGIKGASTCVMNF---DGAQGWLVGEANQGLACMFTMMNDARFQV 291

Query: 301 GMQGIAIAERAYQHAVAYAKDRVQSRPVDGSINA---SAPIIHHPDVKRMLMTMRAYTEG 357
           G+QG+ IAE A+Q  +AYA++R+QSR + G + A   + PII HPDV+RML+T +  TEG
Sbjct: 292 GLQGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEG 351

Query: 358 CRAMASVAAAAYDAAHHHPDADARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGM 417
           CR +    A   D  H    A AR+        ++P+VK + T++  EV SLGVQV+GG 
Sbjct: 352 CRMLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGH 411

Query: 418 GFIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQI--EKTEAE 475
           G+I E G  Q  RD++I  +YEGT  IQA DL+ RK   DGG     +  ++      A 
Sbjct: 412 GYIREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAAN 471

Query: 476 LAKSDNPAAAAVLKRLTAARLAFIDVVDFVAGQTKASPNAVFAGSVPYLMLAGNLVAGWQ 535
                   A  V +RL   R     VV+      +  P    A SV +L  +  ++    
Sbjct: 472 ALGGLQAMATGVGQRLEEWRALSGHVVE----ACERDPQESGAVSVDFLAYSAYVLLAAM 527

Query: 536 LARSLIIAQ-DLASRSFDTDFMLAKVATARFYAEHILNKVPGIRDSIVDGAESVTALALD 594
             ++ + AQ  LA+ S +T F  AK+  A FY   IL +    R++++ GA+ + AL   
Sbjct: 528 WLQAAVRAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPAS 587

Query: 595 AF 596
            F
Sbjct: 588 DF 589