Pairwise Alignments

Query, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

Subject, 601 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  459 bits (1181), Expect = e-133
 Identities = 257/599 (42%), Positives = 358/599 (59%), Gaps = 10/599 (1%)

Query: 3   YTAPIKDMLFDIEHLANI-GEIAKLPGFEDAGLETAQAVLEECARFNQDVIAPLNIEGDR 61
           Y AP++D+ F  + L         LPG +DA  +   A+LEE A+F + V++PLN  GD+
Sbjct: 4   YKAPLRDIRFVRDELLGYEAHYQSLPGCQDATPDMVDAILEEGAKFCEQVLSPLNRVGDQ 63

Query: 62  NPSSFKNGAVTTTPGFKDAFAQYVAGGWQGLQHPSDFGGQGLPKTIGAACGEMLNSANMS 121
              ++    V T  GFK+A+ Q+V GGW  L H  + GGQGLP+++G A  EM+  +N S
Sbjct: 64  EGCTWSESGVKTPTGFKEAYQQFVEGGWPSLAHDVEHGGQGLPESLGLALSEMVGGSNWS 123

Query: 122 FALCPLLSDGAIEALLTAGSDELKAVYLEKLVSGQWTGTMNLTEPQAGSDLAMVRSRAEP 181
           + + P LS GA+  +   G+ E +  YL KLVSG+WTGTM LTEP  G+DL M+R++AEP
Sbjct: 124 WGMYPGLSHGAMNTISAHGTAEQQHTYLTKLVSGEWTGTMCLTEPHCGTDLGMLRTKAEP 183

Query: 182 QPDGTYKVFGTKIFITYGEHDMAENIVHLVLARVTGAPEGVKGISLFVVPKFLVNKDGSL 241
           Q DG+YKV GTKIFI+ GEHDMA+NIVH+VLAR+  AP G KGISLF+VPKFL N +G +
Sbjct: 184 QADGSYKVSGTKIFISAGEHDMADNIVHIVLARLPDAPAGTKGISLFIVPKFLPNAEGGV 243

Query: 242 GERNDVHCVSIEHKMGIKASPTAVLQYGDHGGAVGYLVGQENRGLEYMFIMMNSARYAVG 301
           GERN V C SIEHKMGI  + T V+ +     A GYL+G  N+GL  MF  MN+AR    
Sbjct: 244 GERNGVSCGSIEHKMGIHGNATCVMNF---DAATGYLIGPANKGLNCMFTFMNTARLGTA 300

Query: 302 MQGIAIAERAYQHAVAYAKDRVQSRPVDG---SINASAPIIHHPDVKRMLMTMRAYTEGC 358
           +QG+A AE A+Q  + YA++R+Q R + G      A+ PII HPDV+RML+TM+A+ EG 
Sbjct: 301 LQGLAHAEVAFQGGLKYARERLQMRSLTGPKAPDKAADPIIVHPDVRRMLLTMKAFAEGN 360

Query: 359 RAMASVAAAAYDAAHHHPDADARKQNQAFYEFMVPLVKGYSTEMSLEVTSLGVQVHGGMG 418
           RAM    A   D   +  D + RK+  A   F+ P+ K + TE+  E  + GVQ++GG G
Sbjct: 361 RAMVYFTAKQVDIVKYSQDEEERKKADALLAFLTPIAKAFMTEVGFEAANHGVQIYGGHG 420

Query: 419 FIEETGAAQYYRDAKILTIYEGTTAIQANDLVGRKTARDGGQTAKAIAAQIEKTEAELAK 478
           FI E G  Q  RD++I  +YEGTT IQA DL+GRK     G+  K     + K     A+
Sbjct: 421 FIAEWGMEQNVRDSRISMLYEGTTGIQALDLLGRKVLMTQGEALKGFTKIVHKFCQ--AQ 478

Query: 479 SDNPAAAAVLKRLTAARLAFIDVVDFVAGQTKASPNAVFAGSVPYLMLAGNLVAGWQLAR 538
             N A    ++ L A    + ++   V          V A SV YLM +G     +  A 
Sbjct: 479 EGNEAVKEFVEPLAAINKEWGELTMKVGMAAMKDREEVGAASVDYLMYSGYACLAYFWAD 538

Query: 539 -SLIIAQDLASRSFDTDFMLAKVATARFYAEHILNKVPGIRDSIVDGAESVTALALDAF 596
            + + A+ LA+ + +  F  AK+ TARFY + IL +      +++ GA ++ A+  + F
Sbjct: 539 IARLAAEKLAAGTSEEAFYTAKLQTARFYFQRILPRTRTHVATMLSGANNLMAMDEEHF 597