Pairwise Alignments
Query, 2280 a.a., putative autotransporter protein from Variovorax sp. SCN45
Subject, 825 a.a., Outer membrane autotransporter from Pseudomonas putida KT2440
Score = 179 bits (455), Expect = 1e-48
Identities = 242/906 (26%), Positives = 346/906 (38%), Gaps = 166/906 (18%)
Query: 1440 GSLRKIGMGDLTLATANTYTGGTKIDGGSVSANVSGALGTGPVDVNGNGYLAF---NGNA 1496
GSL +GM A T++ G D + + + AL VD +G+ L F A
Sbjct: 15 GSLPLLGMASPAAHAACTFSPGPGNDTYTCDSGTAPAL----VDSSGDNRLVFPASGSGA 70
Query: 1497 GAGDLRFTTAAASTGVNGGAIEFKDNTSAERASFLNYKGGSVTFTGNSTAGDAV--FDNR 1554
GD+ F S + G++ N A F+ GG + GN GD + F
Sbjct: 71 ITGDVTFGAGKDSIDMASGSVGGNVNQGAGIDDFV-MSGGVIE--GNLNQGDGLDTFHMS 127
Query: 1555 GGSVTVWSNATAGNARIVNSAGGSTNIWDDATAGRATI-VNEAT-----GSLDIRDQATA 1608
GG W T + G DD G + ++E T GS+D R+ TA
Sbjct: 128 GG----WIKGTFDS--------GDYAEMDDGRIGNVNMRLDENTFIMRGGSVD-RNVITA 174
Query: 1609 AQATVVNKTGAVVNIRG-LTTAGTSIGSLEGGGRVLLGNKTLTTGGLNTSTEISGVISGV 1667
+ NI G ++ +G L GG+V G L + G + T G I G
Sbjct: 175 FDKDYIEVFEG--NIGGNISVSGGDDQVLVHGGQV--GGDVLLSTGNDRFTWDGGRIGG- 229
Query: 1668 GGSLVKEGTGTLTLSGANTYTGGTALLKGR----LNLGNAQALGTGELAMDDGTEIGFIA 1723
V G G TALLKG L++ G L D G
Sbjct: 230 ---RVDAGPGD-----------DTALLKGLTPEVLSITLDGGEGNDSLTFDASQPAG--- 272
Query: 1724 PGMTIANAIRFTGNSDPIIDTGAFDAGLSGAISGAGFITKIGTGTLTLSGANSYTGATDV 1783
G N R N+ + A D TL L +NS TG+ +
Sbjct: 273 -GAHYVNWERVALNNGSRL---ALD------------------DTLVLGDSNSSTGSLAL 310
Query: 1784 ---AQGTLRAGAANTFSAASAHNVAAGATLDLAGYSQTVASLTNSGTVSLVGSVPGTTLT 1840
++ T R G F+ ++ TLDL + + L
Sbjct: 311 DASSRITSRQGVITAFAPGQRAAISNAGTLDLTAGNDAMGRLR----------------- 353
Query: 1841 VNGAYVGNGGVLKLGTTLYFNGPPSDRLILNGPTASASGKTTVQITNIGGLGALTNGNGI 1900
+ G Y GN G L+L + L +G SDRL+++ + +G T V I N+ G GA T NGI
Sbjct: 354 IEGDYTGNNGTLRLNSVLAGDGAASDRLVVS--RGAIAGSTQVLINNLNGAGAATAQNGI 411
Query: 1901 EVITAQNGAKTTAQTTKDAFSLADGHVDAGAFEYRLYAADALGQGEN-WYLRSAQ----- 1954
+V+ A+NGA +TA L+ AGA++YRL+ EN WYLRS
Sbjct: 412 QVVEARNGATSTATAFVQTQRLS-----AGAYDYRLFKGGVTAGSENSWYLRSTLVAPPA 466
Query: 1955 -------------------------------------KGVTYYRPETSLYAALPNQLRQG 1977
+ + YRPE +YAA P
Sbjct: 467 PAPVPAPGEPPVIAPAVTPPVAAPAPGQAELPAPVQGQSLPLYRPEVPVYAAAPRGAAII 526
Query: 1978 SLAMLGDVRKRVGDDDVKGTAPSATGSERRAWARVLSTDIDIQQGGTVSPTSKGRLTGFQ 2037
+ LG +R GD + + S W + + Q GTVSP+ G L GF+
Sbjct: 527 ARQALGTFHQRQGDQLLLQGESALPAS----WGQAYGGTLRQQWSGTVSPSLDGDLYGFK 582
Query: 2038 AGTDLLATPN-----WRAGIYVGQLDGDARVSGYASGVQNLAVGRNDLRSQYVGVYGTYT 2092
G DL A GIYV DA V G+A V + +VG L VG Y T
Sbjct: 583 VGQDLYAKVGDNGYRQHVGIYVSHSRLDADVKGFALAVHDRSVGDLKLDGDSVGTYWTLV 642
Query: 2093 SDSGFYADAVVQSGRHRYTVEPLMGIGAAGKGNSLLGSIEVGQAFPIGSSGWTVEPQLQL 2152
G Y DAV+Q R G G++ S+E G + S W VEPQ QL
Sbjct: 643 GPQGAYLDAVLQYTRLDGRARSERGDTLNLDGHAWTASLESGYPITL-SERWRVEPQAQL 701
Query: 2153 IHQHMDLSNSAILGAVVQPQVDSGWLARAGVRVKGEIDTGMG-MLQPYGRVNVYKTSRGT 2211
I Q + L ++ + + R G+R++G G +LQP+ +VN++ G
Sbjct: 702 IAQKVALESARDSVSRISHDAQVELTGRLGLRLEGAFTGSSGRLLQPFAQVNLWHGDGGR 761
Query: 2212 DVARFVNGATTTNIAAPIGGTSTELAGGFTLALNPSTSLYGEVGKLWSSGGDAKVKSGIN 2271
D F + I TS +L G +N + SL+G G +++ D++ +
Sbjct: 762 DTLTFDD---ADKIKTDYRYTSVQLESGVVAQVNEALSLHG--GVQYTANLDSRQQEASG 816
Query: 2272 GSLGVR 2277
+LGVR
Sbjct: 817 VNLGVR 822
Score = 41.6 bits (96), Expect = 5e-07
Identities = 91/432 (21%), Positives = 150/432 (34%), Gaps = 67/432 (15%)
Query: 1088 TGANTYTGNTWVNGGTLRVNNTSGSATGTGSVQVGSGATLAGGGTISGAVTVADG---GS 1144
+G+ TG+ G ++ SGS G + G + GG I G + DG
Sbjct: 66 SGSGAITGDVTFGAGKDSIDMASGSVGGNVNQGAGIDDFVMSGGVIEGNLNQGDGLDTFH 125
Query: 1145 LAPGNSPGTLTTGDLNLANGSFLNYHLGAVGEDPLNDLIQVNGNLVLGGTL--NVTETAG 1202
++ G GT +GD + G +G +N + N ++ GG++ NV
Sbjct: 126 MSGGWIKGTFDSGD-------YAEMDDGRIGN--VNMRLDENTFIMRGGSVDRNVITAFD 176
Query: 1203 GSFGPGLYRLVKYTGSLSDNGLSIGSTPVAAGDLYVQT---SVAKEVNLINSTGVQLGFW 1259
+ + + G++ G+ V+ GD V V +V L STG W
Sbjct: 177 KDY------IEVFEGNIG------GNISVSGGDDQVLVHGGQVGGDVLL--STGNDRFTW 222
Query: 1260 DGGDTVNNGSVGGGSGTWRIG--SPGSPNDTWTNSEGGYNATWKPNQFAMFGGTAGTVTV 1317
DGG G G T + +P + T EG + T+ +Q A
Sbjct: 223 DGGRIGGRVDAGPGDDTALLKGLTPEVLSITLDGGEGNDSLTFDASQPA----------- 271
Query: 1318 DNSGGDISIGGAQFYSDGYVVQGDALTLGNAHTVIKVGDGTRSGASMTATIASQLTGAGG 1377
GGA + + V + L T++ +GD S S+ +S++T G
Sbjct: 272 ---------GGAHYVNWERVALNNGSRLALDDTLV-LGDSNSSTGSLALDASSRITSRQG 321
Query: 1378 LTK----------DDYGTLVLTGANNYTGGTIVSAGVLQGNTTSLQGDIVNNANVTFDQS 1427
+ + GTL LT N+ G + N T ++ D+
Sbjct: 322 VITAFAPGQRAAISNAGTLDLTAGNDAMGRLRIEGDYTGNNGTLRLNSVLAGDGAASDRL 381
Query: 1428 TGGTFGGTMSGSGSLRKIGMGDLTLATANTYTGGTKIDGGSVSANVSGALGTGPVDVNGN 1487
G ++GS + + ATA + G+ S + + T +
Sbjct: 382 V--VSRGAIAGSTQVLINNLNGAGAATAQNGIQVVEARNGATS-TATAFVQTQRLSAGAY 438
Query: 1488 GYLAFNGNAGAG 1499
Y F G AG
Sbjct: 439 DYRLFKGGVTAG 450
Score = 31.2 bits (69), Expect = 7e-04
Identities = 90/414 (21%), Positives = 145/414 (35%), Gaps = 50/414 (12%)
Query: 302 SGGLSGDGTTRANSIQMGGNNNSLTLRAGSVLNGGVVAQGTG-NKLFLEGTNTESDTFQG 360
SG ++GD T G +S+ + +GSV GG V QG G + + G E + QG
Sbjct: 68 SGAITGDVT-------FGAGKDSIDMASGSV--GGNVNQGAGIDDFVMSGGVIEGNLNQG 118
Query: 361 FSSINAASGSKWTLTGKFQPTGNLAVNVDGT-GTTPAQLAMNGVISGTGS-----LTADG 414
W + G F +G+ A DG G +L N I GS +TA
Sbjct: 119 DGLDTFHMSGGW-IKGTFD-SGDYAEMDDGRIGNVNMRLDENTFIMRGGSVDRNVITAFD 176
Query: 415 GGTLALGATNTYAGGTSIKNGTTVQIGTAGALGSGTVSLEGGKLTATSSLNLANSLSFAV 474
+ + N G S+ G + G +G + G + +
Sbjct: 177 KDYIEVFEGNI-GGNISVSGGDDQVLVHGGQVGGDVLLSTGNDRFTWDGGRIGGRVD--A 233
Query: 475 GQRSTVAAASGKTFGIGGTLTLNGSA---TAVFGSTSENGTVRLDSGTTAVTSSAAVVVA 531
G A G T + ++TL+G + F ++ G + ++ + +
Sbjct: 234 GPGDDTALLKGLTPEVL-SITLDGGEGNDSLTFDASQPAGGAHYVNWERVALNNGSRLAL 292
Query: 532 GGTLQVADAARAGTIFSNVASTTVSSGA---TLDLNGYNVTVANLQGAGTLRTRTGNGAQ 588
TL + D+ + + AS+ ++S T G ++N AGTL GN A
Sbjct: 293 DDTLVLGDSNSSTGSLALDASSRITSRQGVITAFAPGQRAAISN---AGTLDLTAGNDAM 349
Query: 589 TTTLQSGNFSGSITGAGQLVKTTAGTLVLTGTNSYTGSTTISGGTLQLGDGGNTGSIDST 648
G+++G+ GTL L NS + L + G GS
Sbjct: 350 GRLRIEGDYTGN-----------NGTLRL---NSVLAGDGAASDRLVVSRGAIAGSTQVL 395
Query: 649 SSITNNAALVFNRSDAVSFTRAIGGTGSVTQSGSGTLTLSGAS----TYSGGTT 698
+ N A + + A G S + T LS + + GG T
Sbjct: 396 INNLNGAGAA-TAQNGIQVVEARNGATSTATAFVQTQRLSAGAYDYRLFKGGVT 448