Pairwise Alignments

Query, 344 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 1e-27
 Identities = 92/311 (29%), Positives = 137/311 (44%), Gaps = 1/311 (0%)

Query: 25  QAAPIDARAALEDAGIEPALLEAPGARVTAEQYVALFALLMERLDDEALCFLSRRLKRGS 84
           QA   +A A L  +GI PA L    AR+T +Q + + A  + R +D  L  L +R++   
Sbjct: 46  QADGCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARREDIGL-ELGQRMRVSC 104

Query: 85  FALMTRATLGAPTFEVALRRVAHTFSLLQDDLTLVLLQDGPLAGFGLRLNDSAAVQQNFL 144
           + ++  A L + T   ALR      +LL     L LL DG    F       +     F 
Sbjct: 105 YGMLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFSASDYQDSPALSAFN 164

Query: 145 HELMLRVYWRLLAWLHGGRLAARRFDFGFELPPYADGYAKVFPGPLQFGQPCTAVWFDAG 204
            E  L     +   L G  L      F    P Y   YA  F  P+ F     A  F+  
Sbjct: 165 AEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAFERR 224

Query: 205 ALQTPVHRDAQAMNAFLAAAPANVILPRLAEQAVSARVRSVLQQNRPAWADLATAASSLH 264
            L  P+       +  ++     + L     QA   R+R +L Q   A   L   A  ++
Sbjct: 225 WLDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLAQQLDAAPGLEGLARQMN 284

Query: 265 MSVSTLQRHLATEGTSFQSLKDQLRRDLAIVRLNTSTVPLAALAEELGFADSAAFQRAFK 324
            S  TL+RHL   G+S+Q L D+LR + A   L    +P+  +AE LGF+++A+F+ AF+
Sbjct: 285 CSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRHAFQ 344

Query: 325 AWTGGAPGSYR 335
            W+G AP  +R
Sbjct: 345 RWSGVAPSHFR 355