Pairwise Alignments

Query, 344 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  171 bits (432), Expect = 3e-47
 Identities = 115/332 (34%), Positives = 167/332 (50%), Gaps = 6/332 (1%)

Query: 7   TIPIAFVQGMLSGLLARGQAAPIDARAALEDAGIEPALLEAPGARVTAEQYVALFALLME 66
           ++ + F+  ML  L    +  P +  A L   GI P LL+ P ARV A+ +  L+  L++
Sbjct: 6   SVAVYFLNAMLHAL----RDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALIQ 61

Query: 67  RLDDEALCFLSRRLKRGSFALMTRATLGAPTFEVALRRVAHTFSLLQDDLTLVLLQDGPL 126
           RLDDE     S  +  GSFAL+ R  +  P  E ALR+    F L   DL   L   G  
Sbjct: 62  RLDDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVRGGR 121

Query: 127 AGFGLRLNDSAAVQQNFLHELMLRVYWRLLAWLHGGRLAARRFDFGFELPPYADGYAKVF 186
           A   ++ N +  + + +  E  L +   +L WL G R+A  R +     P   D      
Sbjct: 122 AVISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDLLLWG 181

Query: 187 PGPLQFGQPCTAVWFDAGALQTPVHRDAQAMNAFLAAAPANVILPRLAEQAVSARVRSVL 246
           P  L+ G   T V FD+  L+ PV +D  A+  FL +AP  +++    +  + A V   L
Sbjct: 182 PD-LRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEVYRHL 240

Query: 247 QQNRPA-WADLATAASSLHMSVSTLQRHLATEGTSFQSLKDQLRRDLAIVRLNTSTVPLA 305
           +  R   W  LA  A    +S ST +R L  EG S+Q +KD++RR +A  RL    + +A
Sbjct: 241 RALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGALSIA 300

Query: 306 ALAEELGFADSAAFQRAFKAWTGGAPGSYRRR 337
            +AE+ GF + +AF RAFK WTG +PGSYR R
Sbjct: 301 EIAEQAGFQEPSAFHRAFKKWTGQSPGSYRAR 332