Pairwise Alignments

Query, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  263 bits (672), Expect = 1e-74
 Identities = 188/518 (36%), Positives = 258/518 (49%), Gaps = 39/518 (7%)

Query: 21  RFAGRTRSFRDYADRVARLAGALRRLGMQPGDRVAMLALNSDRYLEYQMAVPWGGGVLNP 80
           R  G   S+R  A++V   A AL  LG+  GDRV + + N  ++   Q+A    G +L  
Sbjct: 40  RHQGLRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVN 99

Query: 81  CNIRWSAAEILYSLEDSGSTILLVDENFRA---------LVEQMRGQATS---------L 122
            N  +   E+ Y L  SG   L+  E F+          LV ++   A           L
Sbjct: 100 INPAYRVGELEYVLRQSGCRWLVCAEAFKTSDYHTMVQELVPELASAAPGELASECLPEL 159

Query: 123 REVIYCGDGALPAGMHGYEALIDAAAPVPD---TARRD----EDLAGIFYTGGTTGFPKG 175
           R VI       PAG   + A  + A        TAR+     +    I YT GTTG PKG
Sbjct: 160 RGVISLAANP-PAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKG 218

Query: 176 VMLSHTNICSSGFAALGE--GLAPPDSSYLHAAPMFHLADMGLATPHWFQGSTHVIVPS- 232
             LSH NI ++GF  +GE  GL   D   +   P++H   M +A        + +I P+ 
Sbjct: 219 ATLSHYNILNNGFM-VGESLGLTARDRMVI-PVPLYHCFGMVMANLGCITHGSTMIYPND 276

Query: 233 -FSPEAVLNAIAADRVTHALLVPTMIQMLVDHPSMREPRDLRSLRCITYGASPISEAVLN 291
            F  E  L A+A +R T    VPTM   ++DHPS R   DL +LR      +     V+ 
Sbjct: 277 AFDAELTLRAVAEERATILYGVPTMFIAMLDHPS-RAHMDLSTLRSGIMAGATCPIEVMR 335

Query: 292 RAMEAFPGVEFAQAYGMTELSPIATINPPSNHTAEGRKRGKLRSAGRASYCMEVRIVDAD 351
           R ++     E   AYGMTE SP++    P +         ++ + GR    +E ++VDAD
Sbjct: 336 RVIDQMHMAEVQIAYGMTETSPVSLQTGPDDDLEL-----RVTTVGRTQPQLENKLVDAD 390

Query: 352 GAEVPRGTVGEVAVRGPNVMQGYWNKPEQTAAAVRD-GWMHTGDGAYMDDDGYIFVVDRL 410
           G  VPRG +GE+  RG +VM GYW+ P+ TA A+   GWMH+GD A MD+ GY+ +V R 
Sbjct: 391 GCIVPRGEIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQGYVRIVGRN 450

Query: 411 KDMIISGGENVYSAEVENAINQHPAVAACAVIGIPSDEWGEAVHAALVLKPGQGIRPEEL 470
           KDMII GGEN+Y  E+E     HPAVA   VIGIP   +GE + A + L PG     EEL
Sbjct: 451 KDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHPGHSATVEEL 510

Query: 471 IAHCKTLIASYKCPRSVAVLDALPLSGAGKVLKTKLRE 508
              CK  IA +K PR +  +D  P++  GKV K ++RE
Sbjct: 511 QGWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMRE 548