Pairwise Alignments

Query, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

 Score =  265 bits (678), Expect = 3e-75
 Identities = 190/529 (35%), Positives = 269/529 (50%), Gaps = 37/529 (6%)

Query: 10  SVQQHPDKVA--VRFAGRTRSFRDYADRVARLAGALRRLGMQPGDRVAMLALNSDRYLEY 67
           +V + PD+ A  V       ++R  AD V + A AL  LG+QPGDR+ + A N   +   
Sbjct: 27  TVARFPDREALVVHHQALRYTWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCIT 86

Query: 68  QMAVPWGGGVLNPCNIRWSAAEILYSLEDSGSTILLVDENFRA------LVEQMRGQATS 121
           Q A    G +L   N  + ++E+ Y+L  SG   ++  + F+       L   + G A+S
Sbjct: 87  QFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASS 146

Query: 122 LREVIYC-------GDGAL----PAGMHGYEALIDAAAPVPDTAR-------RDEDLAGI 163
               + C       G  +L    P G   + AL   A  V   A        R +D   I
Sbjct: 147 QPGALICERFPELRGVVSLALSPPPGFLAWHALQARAEVVSGEALAARQAQLRCDDPINI 206

Query: 164 FYTGGTTGFPKGVMLSHTNICSSGFAALGEGLAPPDSSYLHA-APMFHLADMGLATPHWF 222
            YT GTTGFPKG  LSH+NI ++G+  +GE L   +   L    P++H   M +A     
Sbjct: 207 QYTSGTTGFPKGATLSHSNILNNGYM-VGESLGLTEHDRLVVPVPLYHCFGMVMANLGCM 265

Query: 223 QGSTHVIVPS--FSPEAVLNAIAADRVTHALLVPTMIQMLVDHPSMREPRDLRSLRCITY 280
              + +I PS  F P A L A+A ++ T    VPTM    +DHP   E  DL SLR    
Sbjct: 266 THGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMFIAELDHPQRGE-FDLSSLRTGIM 324

Query: 281 GASPISEAVLNRAMEAFPGVEFAQAYGMTELSPIATINPPSNHTAEGRKRGKLRSAGRAS 340
             +     V+ R +      E   AYGMTE SP++         A+  +R ++ S GR  
Sbjct: 325 AGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPVSL----QTGAADDLER-RVTSVGRTQ 379

Query: 341 YCMEVRIVDADGAEVPRGTVGEVAVRGPNVMQGYWNKPEQTAAAV-RDGWMHTGDGAYMD 399
             +E ++VDA+G  VPRG +GE+  RG +VM GYWN P+ TA ++  +GWMHTGD A MD
Sbjct: 380 PRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDLAVMD 439

Query: 400 DDGYIFVVDRLKDMIISGGENVYSAEVENAINQHPAVAACAVIGIPSDEWGEAVHAALVL 459
           + GY+ +V R KDMII GGEN+Y  E+E     HPAVA   VIG+P  ++GE + A + L
Sbjct: 440 EQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRL 499

Query: 460 KPGQGIRPEELIAHCKTLIASYKCPRSVAVLDALPLSGAGKVLKTKLRE 508
            PG  +   EL    +  IA +K PR    +D  P++  GKV K ++RE
Sbjct: 500 HPGHAVSEVELREWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMRE 548