Pairwise Alignments

Query, 283 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 1203 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 57.4 bits (137), Expect = 2e-12
 Identities = 39/142 (27%), Positives = 75/142 (52%), Gaps = 5/142 (3%)

Query: 73  LSGVSVDLAREAARQLGLPVELVPFNSAGNVVEAVKTRQVDL-AFVAIDPVRAADMEYTA 131
           L G++ DL    A++ GL +++V  +S  N+++ ++  QVDL A ++I  +R    +YT 
Sbjct: 325 LQGLTADLLAILAQRTGLEIDVVRSDSVSNMLKRLEDNQVDLIAALSIGDLRLNPSQYTR 384

Query: 132 PYVVIEGSYLVRNDSPLQSNAQVDRAGQRVVVGRGSAYDLFLTRELKAATLVRAPTSPAV 191
           PY V     + +  SP++  ++++  G+R+ +  G+    +L ++     +++ P   A 
Sbjct: 385 PYTVSPFVVITKRQSPIRDLSELN--GKRLAIPVGNPLTKWLQQQHPG--VIQVPVETAA 440

Query: 192 TDQFLSQNLEVAAGVKQQLEAD 213
               L  N +V A V  QL AD
Sbjct: 441 RGVELVSNGDVTASVHTQLGAD 462