Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 511 a.a., Antibiotic efflux pump outer membrane protein ArpC from Xanthobacter sp. DMC5

 Score =  451 bits (1160), Expect = e-131
 Identities = 235/493 (47%), Positives = 336/493 (68%), Gaps = 6/493 (1%)

Query: 20  AARRLARWPVQGAVLGTALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQAEGPA 79
           A  RLA     G V  + LL++ C VGPDF+ P+ P  +    Y P   P  T  A+   
Sbjct: 6   ALSRLAPRLKGGVVAASLLLMNGCMVGPDFEAPDAPRVS---GYLPEGTPRPTTSADVHG 62

Query: 80  GQAQELVAGRDIPAQWWDVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNL 139
           G++Q  + GRD+P +WW VFR++ +D  +  ++   P +A+AQAALR A     A  G+L
Sbjct: 63  GRSQAFLRGRDLPGEWWRVFRNKQIDAFVAEAIRNHPDIAAAQAALRAARENALAGEGSL 122

Query: 140 WPQVSAQLGVQRERASEISTQVPGGQL--LTLYNASVNVSYNLDVFGGTRRQIEGAQAAV 197
           +PQVSA  G    + + +++Q   G      LYNASV+VSY LDV+GGTRR +E  +A  
Sbjct: 123 FPQVSAN-GSATRQVTSLASQGESGNTNPYNLYNASVSVSYVLDVWGGTRRNVEALEAQA 181

Query: 198 DTQRYQVEAVYLTLTSNLVTTAIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPK 257
           D QR+Q+EA YL+LT+N+VT AI +ASLRAQ++AT ++++++ EQL ++++QF+ GA+ +
Sbjct: 182 DYQRFQLEATYLSLTANVVTAAITDASLRAQIEATNDIIKSEQEQLKLVQRQFELGAVAQ 241

Query: 258 SIVLQQRTQVAQTQATLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLASLSLPQALPL 317
           S VL Q++ +AQTQATLPP++K LAQ R+QL  + GRLPS+       LASL+LP+ LP+
Sbjct: 242 SDVLSQQSNLAQTQATLPPLQKQLAQQRNQLMAYLGRLPSQDRGEHVTLASLTLPRDLPV 301

Query: 318 SLPSELARQRPDVRASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTT 377
           S+PS L RQRPD+ A+EA LH+A+A VGV  AN+ PQ+QL+ SYG   L    LF+  T 
Sbjct: 302 SVPSALVRQRPDIGAAEASLHKATATVGVNVANMLPQVQLTGSYGRAGLTPDSLFSPGTA 361

Query: 378 LWNIGAGLTQPIFNGGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVADALRALELDAIA 437
            W+I   + Q +F+GG L   + +AVA+ + A AQY++TV+ AF++VAD+LRA+E DA  
Sbjct: 362 AWSIAGSVAQTVFDGGTLYHDKESAVASNEQALAQYKSTVITAFRDVADSLRAIEADAST 421

Query: 438 LQNQAAAESLARQSLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAAL 497
           L+ Q A E  A++S+ +S  Q+ AGAV+Y ++LTA+Q + Q   A V+AQAAR+ DTAAL
Sbjct: 422 LKAQLAYEKAAQESVKISRTQYLAGAVTYPSVLTAEQNFQQAVVARVKAQAARFTDTAAL 481

Query: 498 FQALGGGWWNRAE 510
           FQALGGGWWNR +
Sbjct: 482 FQALGGGWWNRVD 494