Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 471 a.a., Multidrug efflux RND outer membrane protein OprN from Pseudomonas putida KT2440

 Score =  202 bits (513), Expect = 3e-56
 Identities = 142/475 (29%), Positives = 237/475 (49%), Gaps = 31/475 (6%)

Query: 37  ALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQAEGPAGQAQELVAGRDIPAQWW 96
           AL L+ACAVGPD+         QAP   PA + S  VQA+       E +        WW
Sbjct: 13  ALALAACAVGPDY---------QAPATEPAQLSS-DVQAKAYDRSRFESL--------WW 54

Query: 97  DVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNLWPQVSAQLGVQRERASE 156
             F    L+QL++ASL  +  L  A A L+ A +  E    + +P V+++      +   
Sbjct: 55  KQFDDPVLNQLVQASLDGNRDLRVAFARLKSARSIREDAENDPFPVVTSRASSDLGKG-- 112

Query: 157 ISTQVPGGQLLTL----YNASVNVSYNLDVFGGTRRQIEGAQAAVDTQRYQVEAVYLTLT 212
              Q+PG     +    Y+  +++++ LD+FG  +RQIE ++A        ++ + ++L 
Sbjct: 113 ---QIPGQTTERVNSERYDLGLDMAWELDLFGRIQRQIEASEAQEAVAAADLQQLQVSLI 169

Query: 213 SNLVTT--AIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPKSIVLQQRTQVAQT 270
           + LV     +R A LR ++      L+ Q E   + E   D G      V++   ++A  
Sbjct: 170 AELVDAYGQLRGAQLREKIALAN--LKTQQESRTITETLRDAGVGNDLDVVRADARLAGV 227

Query: 271 QATLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLASLSLPQALPLSLPSELARQRPDV 330
           +AT+P ++   A+ RH++A   G+ P    +     A  ++ +ALP+  P EL R+RPD+
Sbjct: 228 EATVPQLQAEQARARHRIATLLGQRPDALSVDLSPKALPAIAKALPVGDPGELLRRRPDI 287

Query: 331 RASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTTLWNIGAGLTQPIF 390
           R++E QL  A+A VGVATA+L+P++ LS   G  A R   + +     W +G  +T   F
Sbjct: 288 RSAERQLAAATANVGVATADLFPRVSLSGFLGFTAARGSQIGSSAANAWALGPSITWAAF 347

Query: 391 NGGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVADALRALELDAIALQNQAAAESLARQ 450
           + G++RA+ R A A  + A A Y   VL A +  A+A    +     L +       +R+
Sbjct: 348 DLGSVRARLRGAKADAEGALANYEQQVLLALEESANAFSDYDKTQQRLLSLMRQSDASRK 407

Query: 451 SLDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAALFQALGGGW 505
           + +L++ ++R G V Y+ LL A++  L    A  Q +   Y    ++++ALGGGW
Sbjct: 408 AAELASIRYREGTVDYLVLLDAERERLSAEDAQAQGEVDLYRGIVSIYKALGGGW 462