Pairwise Alignments

Query, 536 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  208 bits (530), Expect = 3e-58
 Identities = 142/474 (29%), Positives = 214/474 (45%), Gaps = 19/474 (4%)

Query: 37  ALLLSACAVGPDFKTPELPAAAQAPDYTPAPMPSRTVQAEGPAGQAQELVAGRDIPAQWW 96
           A+LL+ C +GPDF+ P+          + AP     +Q E  A Q Q       +  +WW
Sbjct: 13  AVLLTGCTLGPDFQRPD----------SQAPQQWAPLQGEAAASQPQ----AEPLELRWW 58

Query: 97  DVFRSEPLDQLIRASLAQSPTLASAQAALRQAEATYEAKTGNLWPQVSAQLGVQRERASE 156
           + F    L  LI+    ++  L  A A L Q+ A       +  P V    G  R R S 
Sbjct: 59  ETFHDARLSALIQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSA 118

Query: 157 ISTQVPGG----QLLTLYNASVNVSYNLDVFGGTRRQIEGAQAAVDTQRYQVEAVYLTLT 212
                P G    +   L+   +   + LD++G  RRQ+E A A V+        V L L 
Sbjct: 119 DGLSDPSGKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALL 178

Query: 213 SNLVTTAIREASLRAQLQATREVLQAQTEQLNVIEKQFDTGAIPKSIVLQQRTQVAQTQA 272
           S      I+  +++  L  T++ L+     L + + +   G   +  V Q   QVA  ++
Sbjct: 179 SETAGNYIQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIES 238

Query: 273 TLPPIEKALAQTRHQLAVFAGRLPSEAGLPEFDLASLSLPQA-LPLSLPSELARQRPDVR 331
            LP +E       + L++ A   P            L  PQ    + LPSELA +RPD+R
Sbjct: 239 RLPSLEAQRDDLINALSLLAAEPPRSLQAELLQGGELPAPQQKFAIGLPSELAERRPDIR 298

Query: 332 ASEAQLHQASAAVGVATANLYPQIQLSASYGNNALRARDLFTGPTTLWNIGAGLTQPIFN 391
            +EA+LH A+A++GVA A+ YP I+LS S G  AL+  D     +  +  G  ++ PIF 
Sbjct: 299 QAEARLHAATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFE 358

Query: 392 GGALRAQQRAAVAAYDSAAAQYRNTVLGAFQNVADALRALELDAIALQNQAAAESLARQS 451
           GG L+       A    AA  YR  VLGA+  + D LR      +   + A A    R +
Sbjct: 359 GGRLKGTLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIA 418

Query: 452 LDLSTAQFRAGAVSYVTLLTAQQAWLQTHTALVQAQAARYADTAALFQALGGGW 505
           L+ +  Q+  GAV ++ +LT Q A L +    + + AA       L++ALGGGW
Sbjct: 419 LETAQRQYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGW 472