Pairwise Alignments

Query, 1617 a.a., Rhs-family protein from Variovorax sp. SCN45

Subject, 1530 a.a., putative RHS family protein from Pseudomonas putida KT2440

 Score =  347 bits (891), Expect = 5e-99
 Identities = 338/1224 (27%), Positives = 512/1224 (41%), Gaps = 196/1224 (16%)

Query: 354  GGAISLATGC---ESFSHTDFSLAAPLPIDWTRTYRSNLGAFDQGSLGARWVTPYSTRVD 410
            G  +++ATG    E     DF+L   L I W R Y S     D G LG  W  PY   V+
Sbjct: 289  GNPVAVATGSKLQEGPEDIDFNLPGLLAIQWARRYDSRDMRSD-GLLGMGWSVPY--EVE 345

Query: 411  IAKALKGRRQGRMSLIYHGIDGRGHAFPLLAVGQSHHDPIEEMTLTRLSE-RLLVADFGK 469
            +A+      QG    IY   DG       L+ G +    ++ +   +L + + +V D  +
Sbjct: 346  LARV--PHPQGGTLWIYIDNDGNRLELGRLSAGDAFISAVDGLAFFQLEDGQTVVEDINE 403

Query: 470  PVPAGESADWRETYELVDTVPAKAASQGKQHFRLVAQHTVGGAAIGLRYDH------VIA 523
             +           Y + DT P        +  RL+         + L YD       +  
Sbjct: 404  GL-----------YRVFDTDPL-----NPKRSRLIRLGDRNLNCLDLLYDEQGRLKALYD 447

Query: 524  ATGEQVLS--------DIVSKQGEVVIAHVGTQPDASTGLIKSLWELKGGQVVRQLAA-- 573
              G+ V+           VS+   V + + GT     + L+ S      GQ+   L A  
Sbjct: 448  KYGQTVVQLHYAARHPQRVSEVSRVFLKNGGTPTVERSELLVSYRYTDNGQLHEVLDATD 507

Query: 574  -----YTHDGEGDLVTAQDENGAAWQYSYSHHLVTRYADRTGRGMNLQYDGTGV------ 622
                 +T+  EG L + Q  +GA  +Y ++     R+A    R    + DGT        
Sbjct: 508  QRVRRFTYTPEGYLNSHQLASGAVREYEWA-----RFAIPETRPTPKRLDGTPYRLPPLL 562

Query: 623  ------DAKAVREWSDDGSFALTLEWDRNIRLTYLTDAAGGETWYYYDVLGYTYRIIHPD 676
                  + + +R W  DG      E++     T +TD  G    YY+  L   Y+ I P 
Sbjct: 563  EPQPDHEWRVIRHWGSDGE-EYRFEYNLEAGETLVTDNLGRRDHYYWGPLYEVYKHIDPQ 621

Query: 677  KLEEWFLRDDAKNITRHIHTDGTTDDYVYDAKGNLKTHIRADGSSIHYEYDARHRVTGI- 735
                W     A  + + I   G    Y YD  G L       G S H +Y  RH    I 
Sbjct: 622  G-NCWLAEVIAGQLIKRIDPQGGEWRYSYDDIGRLIETRDPLGRSEHIKY-LRHWALPIQ 679

Query: 736  -LDAEGGVWKREHDAQGNLVEETDPLGHKTGYAYDEAGRPVRITDAKGGSKTLEYMPAGQ 794
              D  G   +  +D+ GNL+ + DPLG +T Y YD  GR  ++TDA   SK L +   GQ
Sbjct: 680  VTDTAGRTRQYGYDSHGNLLWQQDPLGRETQYQYDPEGRVTQVTDALEKSKYLSWNTCGQ 739

Query: 795  LASYTDCSGKTSLWAYDGRGRLVKAVDAAGNATRYRYTPVVETATQGDGNHPGQLEEIVL 854
            L SY DCS   +L+ YD  GRL ++++A G  T +RY            +  G L E   
Sbjct: 740  LLSYRDCSNAQTLYHYDAHGRLRESINARGEHTHFRY------------DARGYLVESER 787

Query: 855  PDDTREHFAHDAEGRLLCHTDALGRRTRYSYTRAGLVAGRVDAAGHTLRYHWDLMGRLTE 914
            PD   + +  D  G+L  + D   +  ++ Y  +G +  R DA G+++++ +D  GRL +
Sbjct: 788  PDGRIDRYEIDVAGQLTRYIDPAQKTLQFRYDPSGRLVERTDAMGYSVKFRYDAYGRLLQ 847

Query: 915  LHNENGSRYDFSYDPVGRLLEEVGFDKKSTQYRYEPTTGVLAEVIEAGQGTT-------- 966
            L NEN   Y F +D + RL+ +   D     Y Y     VL EVI      +        
Sbjct: 848  LTNENDESYRFGWDELDRLVAQKDLDGSGRLYAY----NVLDEVIRLTHVPSPDEQPPLS 903

Query: 967  --------------LEFDALGRLGERRAGGEAERFAYDGNGRLVEASNSD-----ARLQW 1007
                           E DA+GRL  +R       + YD    L+  + +D      +L +
Sbjct: 904  DNAPPTRTTAIRHDFERDAIGRLVSKRTEDGTTDYRYDAADNLLSITFTDNKGEKQQLDY 963

Query: 1008 FYDRAGNLVREHQHYLESSRTAVWRHGYDELNQRVTTIRPDGHITQWLTYGSGHVHGLLI 1067
             YD  G L+       E++   + ++ YDEL    T + PD      L YGSGH+H + +
Sbjct: 964  TYDANGQLLS------ETNSAGLLQYRYDELGNLQTLVLPDQRELNHLYYGSGHLHQINL 1017

Query: 1068 DGQDVLGFERDDLHREITREQGNGLTQKQRYDPAGRLLEQQISQTRPGAIESLGGIRRSY 1127
            +G+ +  FERD +H E+ R QG  L  + RYD +GRL  + I   R    E L  + ++Y
Sbjct: 1018 NGRVISDFERDAVHDEVLRTQGK-LVTRTRYDTSGRLAGKAI-HYRDAPAEVLPLLDKAY 1075

Query: 1128 AYDKAGQLVA---IGDSRRGNLSYRYDP-------VGRLLE----ANSRLGRETFAFDPA 1173
             YD +  L+A       RRG  +   D        +GR L+      +  G   + +D  
Sbjct: 1076 RYDASDNLIAEVLTQTQRRGMSNAANDENANLEQIIGRFLDLPHTGKTYSGHNRYGYDLN 1135

Query: 1174 GNIGHPSSDTEGDAQAAAGRITNRVAVRLGG--DGRSMAGRLMDNLLKDYAGTHYKWDER 1231
              +    +  +      A ++ +    + G   DG  + G +  N +  Y    Y++D  
Sbjct: 1136 EQL---QTVHQSRPNWQATQVEDFKYDKAGNLFDGPKLNGLIKHNRVLVYQDKRYRYDRF 1192

Query: 1232 GNLVERSRNGEKTV--FTWDGYNRMRSAETF----GETTSFSYDPLGRRIAKRTGHACTL 1285
            G L E+ R G   V  F +D   R+   E +     E   F+YDPLGRRI+K        
Sbjct: 1193 GRLCEK-RIGSNWVQYFEYDAEQRLVCVEQYRSGERERVVFAYDPLGRRISKEV------ 1245

Query: 1286 FGWDGDTLAFESTQSTEARQEQM--WRGDSVHYIHEPGSFVPLMQIRQAQAVALSETTDV 1343
                            E R+  +  W+G              L+Q  Q+   +L     V
Sbjct: 1246 ----------YQRDYPEPRRRVLFHWQG------------FRLLQEVQSGLASLYVYATV 1283

Query: 1344 KALIADNGGRYDIEQDPLWNGEQSRTPAPFGKEEIAFYQCDHLGTPQELTDHEGRVAWSA 1403
            ++             DPL     +R     G E I ++    +G P++LTD +G   W +
Sbjct: 1284 ES------------YDPL-----ARVDGKPGSEAIHYFHTTLVGQPEQLTDSDGNTIWRS 1326

Query: 1404 SYKAWGEARQAISE-AGRRAGFRNPIRFQGQYWDDETGLHYNRYRYYDPLAGRFISKDPI 1462
             +  WG   + I+E   ++ G    +R QGQY D ETGLH+N +R+YDP  GRF + DP+
Sbjct: 1327 DHHGWG---KIINEWHSQQNGREQNLRNQGQYIDRETGLHFNIFRFYDPDIGRFTTTDPL 1383

Query: 1463 GLKGGVNALFYAPNPVEFIDPLGL 1486
            G++GGVN   YAPN V + DPLGL
Sbjct: 1384 GIEGGVNLYSYAPNIVNYSDPLGL 1407