Pairwise Alignments

Query, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 269 a.a., Shikimate dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  163 bits (413), Expect = 3e-45
 Identities = 95/263 (36%), Positives = 137/263 (52%), Gaps = 3/263 (1%)

Query: 1   MISGKTTLIAHLGFPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAASLPQIFKFSN 60
           MI G T L+A +G P    K+P  +N WF+    +  ++P+ +      +    +  + N
Sbjct: 1   MIRGSTELVAIVGSPIAQVKSPQNFNTWFNHNNCNLAMLPIDLHEAALDSFADTLRGWQN 60

Query: 61  LRGALVTMPHKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGVERKG 120
           LRG +VT+P+K    + VD ++  A   G+ N I +  DG LLGD  DGAGF+    + G
Sbjct: 61  LRGCVVTVPYKQALANRVDGLSERAAALGSINVIRRERDGRLLGDNVDGAGFLGAAHKHG 120

Query: 121 RLFKGTRVLVSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALAARLREHYPQMKVAT 180
               G R LV G GGVGSAIA ++A AG A + L D S A  GA+   L   +P + V+T
Sbjct: 121 FEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNGFPGLTVST 180

Query: 181 GSKDPAGYDVVVNATPLGMKEGDPLPFD---VDRIDPGTFVGEVVMKTEYTPLLEAAKAK 237
                  +D+V NA+P+GM     LP     +  + P T V +VV   E TPLL  A+  
Sbjct: 181 QFSGLEDFDLVANASPVGMGTRAELPLSAALLATLQPDTLVADVVTSPEITPLLNRARQV 240

Query: 238 GCQVQVGTDMLFEMIPAYLEFFG 260
           GC++Q G +M F  +     F G
Sbjct: 241 GCRIQTGPEMAFAQLGHLGAFMG 263