Pairwise Alignments

Query, 277 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Variovorax sp. SCN45

Subject, 286 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score = 82.8 bits (203), Expect = 8e-21
 Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 5/265 (1%)

Query: 12  LGFPTEAFKAPMIYNPWFDKQGIDAVVVPMGVKPEDYAASLPQI--FKFSNLRGALVTMP 69
           +G+P +  ++P+I++ W  K GI      + V P+D+   +  +   K     G   T+P
Sbjct: 15  VGYPIKHSRSPIIHSYWLKKFGIAGSYTAVEVSPDDFPKFIATLKEGKPGAAVGGNATIP 74

Query: 70  HKVTTMSLVDEVTPTARVAGACNAILKRPDGTLLGDQFDGAGFVRGV-ERKGRLFKGTRV 128
           HK     L D     A   GA N I    +G L     DG GFV  + ER     K  R 
Sbjct: 75  HKEAAYRLADHPDALAEELGAANTIWME-EGKLHATNTDGYGFVSNLDERHPGWDKTQRA 133

Query: 129 LVSGTGGVGSAIAASIAAAGAAELMLFDMSEASAGALAARLREHYPQMKVATGSKDPAGY 188
           +V G GG   A+  S+     AE+ + + +   A  LA R          A   +   G 
Sbjct: 134 VVFGAGGASRAVIQSLRDRDVAEIHVVNRTVERARELADRFGPRVFSHPQAALQEVMHGA 193

Query: 189 DVVVNATPLGMKEGDPLPFDVDRIDPGTFVGEVVMKTEYTPLLEAAKAKGCQVQVGTDML 248
            + VN T LGM   +    D   +     V ++V     TP+L  A+ +G     G  ML
Sbjct: 194 GLFVNTTSLGMNGTEAPHLDFSHLAANAVVTDIVYVPLKTPILNMAQEQGIATVDGLGML 253

Query: 249 FEMI-PAYLEFFGFGTASPEELRAV 272
                P +  +FG      E LR++
Sbjct: 254 LHQAKPGFRRWFGRIPEVDETLRSL 278