Pairwise Alignments

Query, 406 a.a., Multidrug resistance transporter, Bcr/CflA family from Variovorax sp. SCN45

Subject, 396 a.a., bicyclomycin/cysteine/sulfonamide efflux transporter from Escherichia coli BL21

 Score =  146 bits (368), Expect = 1e-39
 Identities = 106/372 (28%), Positives = 179/372 (48%), Gaps = 15/372 (4%)

Query: 14  SFAL--LLPLLLAAQPVATDSYLPALPAIAKELG--SASTSLTL--FVLAFGFAQLLCGP 67
           SFA+  +L LL    P++ D YLPALP I+ + G  + ST +TL  ++L F   QL+ GP
Sbjct: 8   SFAIVFILGLLAMLMPLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGP 67

Query: 68  LADRFGRRPVLLAGLGCYVLAALGGAFADSVALLAGWRALQGFSMAAILVCSRAAVRDLY 127
           +AD FGR+PV+L G   +  AA+  A A+++  L   R   G + AA  V   A +RD+Y
Sbjct: 68  MADSFGRKPVVLGGTLVFAAAAVACALANTIDQLIVMRFFHGLAAAAASVVINALMRDIY 127

Query: 128 PAHEGPHVMARGLTGLGVVGLLAPLLGAWLVQGAGWRWVMVAMAVYASVLFAMCWYSFAE 187
           P  E   +M+  +    +  L+AP++G W++    W ++   +A+ A +  AM ++   E
Sbjct: 128 PKEEFSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWHYIFWILALAAILASAMIFFLIKE 187

Query: 188 TRKPMGED--GLSAPRGSTRTVFASRSFRAWASVAASTYGGLFCFLLLSPMVYIGYLGWS 245
           T  P       +    G+   +F  +   ++   +  ++ G+F FL   P VYI     +
Sbjct: 188 TLPPERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVA 247

Query: 246 PAWYGWIPAGGSLVYIFSTTMCRT-LLRRYGPVRTVRLGASLSITGAVIQALGCWLMPLS 304
           P  +G+  A  ++V++F  T+  +  +RR G +   R G  +    A    +   L+ L 
Sbjct: 248 PENFGYYFA-LNIVFLFVMTIFNSRFVRRIGALNMFRSGLWIQFIMAAWMVISA-LLGLG 305

Query: 305 AVPLLFGHAVYCLGHGIHQPCGQAGAVGDLPHLAGRAVSWSGFGMMMVAFCVGQLAARFV 364
              L+ G A +     +      A  + + PH+AG A S +G       F +G +    +
Sbjct: 306 FWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAG----TFRFGIGAIVGALL 361

Query: 365 DADYSYGAWPMV 376
                  AWPM+
Sbjct: 362 SLATFNSAWPMI 373