Pairwise Alignments

Query, 154 a.a., Protein-export protein SecB (maintains pre-export unfolded state) from Variovorax sp. SCN45

Subject, 161 a.a., Protein-export protein SecB from Pseudomonas putida KT2440

 Score =  108 bits (269), Expect = 5e-29
 Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 10/161 (6%)

Query: 1   MADQQ-----AQD--PVFQIQRVYLKDLSLEQPNSPAILLEQEQPTVDIQLGVDAQPVAE 53
           M DQQ     A+D  P F +QR+Y++DLS E P SP I  +  +P+V + L    + +  
Sbjct: 1   MTDQQTNGAAAEDNSPQFSLQRIYVRDLSFEAPKSPQIFRQTWEPSVALDLNTKQKSLEG 60

Query: 54  GIFEITVSATVQTKIQDKTVFLVEAKQAGIFEIRHLPEEQMGAILGIACPQIVYPYLRGN 113
              E+ ++ +V  K  D+  F+ E +QAGIF I +L    M   LG  CP I++PY R  
Sbjct: 61  DFHEVVLTLSVTVKNGDEVAFIAEVQQAGIFLIANLDAPSMSHTLGAFCPNILFPYAREA 120

Query: 114 VADVIQRGGFPPVHLAEINFQAMY--EQQQAQAAGQAAPTL 152
           +  ++ RG FP + L+ +NF A+Y  E Q+ Q AG+ APT+
Sbjct: 121 LDSLVTRGSFPALMLSPVNFDALYAQEMQRMQEAGE-APTV 160