Pairwise Alignments

Query, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

Subject, 380 a.a., acetylornithine deacetylase from Pseudomonas putida KT2440

 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 104/393 (26%), Positives = 166/393 (42%), Gaps = 48/393 (12%)

Query: 11  LISRPSVTPDDAGCQQ-------ILGERLALLGFTLETIESGPADFRVTNLWAVRRPADA 63
           LI+ PSV+       Q       +L   L  LGF  +  +  P  F   NL A R     
Sbjct: 13  LIAAPSVSCTQPALDQSNRQVIDLLAGWLGDLGFKCDIQQVSPGKF---NLLASRGTGPG 69

Query: 64  AATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDMKTSVAAFVTSIEDF 123
                 LV AGH+D VP    + W S P      DG+  G G+CDMK   A  + ++   
Sbjct: 70  G-----LVLAGHSDTVPYDE-QLWASDPLKLIETDGRWVGLGSCDMKGFFALVIEAVIPL 123

Query: 124 LQ-AVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVID-YCIVGEPTAVERCGDM 181
           L+    EP L LA   T DEE      ++     LA  G+ +    I+GEPT +      
Sbjct: 124 LEHDFKEPLLILA---TCDEE-----SSMSGARALAEAGQPLGRAAILGEPTGLRPI--- 172

Query: 182 IKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELVAINAAGGWDAA-SNPYF 240
                +G +  ++ + G  GH + P L ++ + ++   + EL+ +     W    SNP F
Sbjct: 173 --RMHKGILMDRIDILGRSGHSSDPSLGRSAMEAMHAVMGELMGLRQQ--WQQTYSNPQF 228

Query: 241 Q-PTSWQISNFHSGTGASNVIPGSAVIDFNFR----FSTESTPESLQQRVHAVLDAHQVD 295
             PT         G    N I G   ++F+ R       +    ++++++  V + H+V 
Sbjct: 229 TVPTPTMNFGCIHGGDNPNRICGQCALEFDLRPLPGMDVDQLRAAIREKLVLVAERHEVR 288

Query: 296 YTLAWTIGGLPFLTTPGELVTAVQGAIRDETGIETELSTSGGTSDARFIAKICRQVVELG 355
              A     +P      + V  VQ A R  TG   E    G  ++A ++ ++  Q + LG
Sbjct: 289 IDYAPLFPEVPPFEQAAD-VELVQVAER-LTGHRAEAVAFG--TEAPYLQQLGCQTIVLG 344

Query: 356 PVN-ASIHKIDEHIDVAEIETLKNIYVRTLKQL 387
           P + A  H+  E+++++ IE      VR L+ L
Sbjct: 345 PGDIACAHQPGEYLEMSRIEPT----VRLLRDL 373