Pairwise Alignments

Query, 393 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Variovorax sp. SCN45

Subject, 391 a.a., putative Acetylornithine deacetylase from Pseudomonas putida KT2440

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 96/353 (27%), Positives = 142/353 (40%), Gaps = 35/353 (9%)

Query: 53  NLWAVRRPADAAATTRTLVFAGHTDVVPTGPVEQWTSHPFTPTHRDGKLYGRGACDMKTS 112
           NL+A   P D       +V +GHTDVVP    + WT  PF  + RDG+LYGRG  DMK  
Sbjct: 59  NLFATVGPRDVGG----VVLSGHTDVVPVDG-QAWTVEPFALSERDGRLYGRGTADMKGF 113

Query: 113 VAAFVTSIEDFLQAVPEPRLTLALLLTSDEEGPGVDGTVVVCNTLAARGEVIDYCIVGEP 172
           +A+ + ++  FL      R+ + L  + DEE  G  G   +   L  R      C++GEP
Sbjct: 114 IASVLAAVPAFL--AQPLRMPVHLAFSYDEE-VGCLGVRSMLAALQQRPCKPRLCLIGEP 170

Query: 173 TAVERCGDMIKNGRRGTMSGKLTVKGVQGHIAYPHLAKNPVHSVAPALAELVAINAAGGW 232
           T ++        G +G ++ +  V+G   H AY     N +   A  + +L  I  A   
Sbjct: 171 TELKPV-----LGHKGKLAMRCQVQGAACHSAYAPYGVNAIEYAAKLIGKLGEIGEALAL 225

Query: 233 DAASNPYFQPT-SWQISNFHSGTGASNVIPGSAVIDFNFR----FSTESTPESLQQRVHA 287
               +  F P  S   +    G  A N++P     DF  R    F  ++  + LQ    A
Sbjct: 226 PVHHDERFDPPFSTVQAGVIKGGRALNIVPDECEFDFEVRALPGFEAQAVADQLQTYAEA 285

Query: 288 VLDAHQVDYTLAWTIGGLPFLTTPG----------ELVTAVQGAIRDETGIETELSTSGG 337
            L         A  I   P    PG           LV  + G+   +T       T GG
Sbjct: 286 ELLPRMRKVNTASAIRLAPLSAYPGLATPEDSEAARLVALLSGS---DTFGTVAFGTEGG 342

Query: 338 TSDARFIAKICRQVVELGPVNASIHKIDEHIDVAEIETLKNIYVRTLKQLDAA 390
             D   I  +   V   G ++   HK DE + V ++     + +R +  L  A
Sbjct: 343 LFDQAGIPTV---VCGPGSMDQG-HKPDEFVSVEQLRGCDAMLLRLVDYLKQA 391