Pairwise Alignments

Query, 483 a.a., sodium-solute symporter, putative from Variovorax sp. SCN45

Subject, 624 a.a., L-arabinose symporter (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  101 bits (251), Expect = 8e-26
 Identities = 109/477 (22%), Positives = 211/477 (44%), Gaps = 54/477 (11%)

Query: 5   LVIVYLLVTIAIGLYAAKRVKN----TTDFAIAGRHLPLFMIVTTTFATWFGSETVLGIP 60
           + IVY L  +++GL+ ++  K       ++ +A + L  + +  +  A    +E  +G  
Sbjct: 12  IFIVYALAIVSVGLWVSRTKKGLEKTAQEYFLADKSLTWWAVGASLLAANISAEHFIGTS 71

Query: 61  AKFIEGGLNGVVEDPFGAGTCLILVGLFFAGKLYRMTLLTISDYYRERYGRTVEVACSLI 120
                 GL G+    + A   LI+V  +F     +  + T+  +  ER+ + V  A ++ 
Sbjct: 72  GSGFAIGL-GISAYEWIAAIALIIVAKYFLPIFLKHGVYTMPQFLSERFNKGVSTAFAVF 130

Query: 121 IMLSYLGWVSAQVTALGLVFNLLSAGVISIPMGMVIGVISILA----YTLFGGMWSVAVT 176
            +L Y   V   +T++  +  L    ++ IP+    G+I +L     Y+++GG+ +VA T
Sbjct: 131 WLLVY---VFVNLTSVSYLGALALDKIMGIPLQY--GIIGLLIFSGIYSIYGGLEAVAWT 185

Query: 177 DFIQMIILVAGLAVIAMFAGSMAGGADKVVA-----FAVSKDLFKFWPEPSWHDMV---- 227
           D +Q+IILVAG  +    A    G  D + A     +  +KD F     P    MV    
Sbjct: 186 DVVQVIILVAGGLITTFLALDAVGMGDGIFAGMSNLYNDAKDHF-VMIMPQGRVMVPDGL 244

Query: 228 ------FFFAAAITMMLGSI---------PQQDVFQRVMSANSVKAATRGPVIGGLAYIL 272
                 F     + ++LG +           Q + Q+ ++A S++ A +G +  G   +L
Sbjct: 245 GGSRDAFQDLPGLAVILGGMWLTNLGYWGFNQYIIQKGLAAKSIEEAKKGLLFAGYLKLL 304

Query: 273 FAFVPMFLVASALLIM----PEQTATLLK---------EDPQKVLPTLVLQKMPFVMQVL 319
              + +    +A +++    PEQ A +L          +   +  P L+   +P  ++ L
Sbjct: 305 MPIIVVIPGIAAYVLINDYSPEQLAAILNMPVEHIGTIQKSDEAYPWLLRNFIPNGIRGL 364

Query: 320 FFGALLSAIKSTASATLLAPSVTFTENIWR-QFRPAGTDRQNLMTMRITVLLFSAAVLAY 378
            F AL +AI S+ ++ + + S  FT +I++  F+P   + Q + T RI  ++  A  +  
Sbjct: 365 AFAALAAAIVSSLASMINSTSTIFTMDIYKVYFKPNANNHQLVRTGRIVAVVALAIAMIV 424

Query: 379 AIRMQG-TPIYELVSGAYQVPLVGAFVPLVCGLYWRRATTQGAVASIVLGIGVWLLF 434
           A ++     +++ +         G  V    GL WR+AT   A+ + +  I   ++F
Sbjct: 425 APQLASLDQVFQYIQEYTGYIYPGVVVVFGMGLIWRQATASAALWTAIATIPAGIVF 481