Pairwise Alignments

Query, 437 a.a., Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB from Variovorax sp. SCN45

Subject, 421 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 50.8 bits (120), Expect = 8e-11
 Identities = 73/343 (21%), Positives = 134/343 (39%), Gaps = 17/343 (4%)

Query: 22  AQAQTEIQWWHSMDGALNDWVNDLAKQFNESQKDYKVVATYKGEYDQSMAAGIAAFRAGN 81
           AQA  EI++W  +       +++L  +F ++  D   V      Y       IAA  +G 
Sbjct: 26  AQA-VEIEYWQYVFDTRVKAMDELIAEFQKANPDI-TVKQVTFPYADYQTRVIAANLSGK 83

Query: 82  APDILQVFEVGTATMMYSKGAIKPVA-DVMKEGGQKFDPKAYIPAVAGYYTAPNGQMLSF 140
            PD++Q+F  G      + G ++P+  D       K + + + P V+      +      
Sbjct: 84  GPDVMQLF-YGWLDKFAAGGILQPLPKDAFPH--DKIESE-FFPIVSAMKRGDD--YYGL 137

Query: 141 PFNSSTTVFYYNKDAFKTAGLDPEKAPATWPEVVAAAAKLKASGSQCPFTTSWMSWAQLE 200
           P    +   +YNK  F  AGLD    P T  E VAAA K+    +    T +  +     
Sbjct: 138 PTAVRSLALFYNKKLFTEAGLDAANPPKTLDEFVAAAEKIAKHDAAGNLTVAGSTLDMGG 197

Query: 201 SFSAWHNTSYATKNNG--FGGLDARLEFNSPLHVRHFENLSNMAKQGLFVYKGRASKPIT 258
               W       +  G  +   D ++ +NS   ++  +  +++  +      G   +   
Sbjct: 198 QDHQWWREVLIRQYGGEPYADNDQKVTYNSEPGIQALKFYTSLQLEKKIGQVGFMDEGQA 257

Query: 259 SFTSGECAMFIGSSGSYASVKRDAKFKFAESALPYY-PDVQGAPQNTIVGGASLWVMSGK 317
           +F +G+  M I  +    S +    F++  + LP    +++    +    G S      +
Sbjct: 258 AFRAGKAGMTIDGTFRLGSFRTIKDFEWGVTELPTNDKNIRSNYASYFANGISAKTTGEE 317

Query: 318 PAANYKGVAAFFSFLSSPKVQSESHMRTGYLPITMASYELTEK 360
             A+ K    F +++SSP+  +      G LP    S  LTE+
Sbjct: 318 LEASKK----FLAYISSPEAMAIWLKTVGELP-ARRSAALTEE 355