Pairwise Alignments

Query, 314 a.a., ABC transporter, substrate-binding protein PA3836 from Variovorax sp. SCN45

Subject, 340 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 23/226 (10%)

Query: 101 IPVVYSAITDPVAAKLVKNWDATGTNVTGVSDLSPLEKHVALIKQVVPAAKRIGVIYSPG 160
           IP V++ ++ PV   +V +  ++  N+TG   L P+E  V LI+   P  +R+G++Y+P 
Sbjct: 113 IPAVFAVVSQPVGG-VVPSLTSSERNITGTLYLVPMETQVNLIQSYRPL-QRLGMVYNPL 170

Query: 161 EANSVAIVESLKKAASAAGMTV-------------AEAAAARTVDVPTAAQSLVGKADVI 207
           E NS    E L+    A G +V             A + AA+  ++  A      + D +
Sbjct: 171 ERNSQVAAEQLEGIGKATGFSVVALPVEVEGGKPKASSIAAKVAEIKAA------RVDFL 224

Query: 208 YTPTDNNVVSAFEGIVKVAQQAKLPV-VAADTATVERGAVAALGLNYSDIGRQTGKIVVR 266
           Y P D  +    + + + A    +P   AA+   V   A+      Y  +G+ T     +
Sbjct: 225 YIPPDTFLNVNRDLLTQAALDHAIPTFAAAENPVVTSKAMFGGVYRYYTVGQLTAYKAEQ 284

Query: 267 IL-KGEKPGTIASQTSTNFELVVNPGAAKLQGVTLSDELLKTAKVV 311
           IL +   P  I         +++N    +  G+    +L+  A+++
Sbjct: 285 ILVRKIAPKDIPIDAPKRLSVLINMPVVRQIGLFPPMKLMGLAEII 330