Pairwise Alignments

Query, 577 a.a., Type IV fimbrial assembly, ATPase PilB from Variovorax sp. SCN45

Subject, 577 a.a., type II secretion system ATPase GspE from Rhodanobacter sp000427505 FW510-R12

 Score =  343 bits (880), Expect = 1e-98
 Identities = 209/565 (36%), Positives = 327/565 (57%), Gaps = 25/565 (4%)

Query: 23  LVSAGKLPAKT---AEDIYQKSLSGR-TSFIAELTGTGAVSAADLAHTLSSAFGAPLLDL 78
           LV+ G+L       A  ++++S  G  T+ +A L   G VS  DLA   +     PLL  
Sbjct: 27  LVARGRLKEGDLGRARRLHEESAEGTLTALMARL---GLVSERDLAEAWAELLQVPLLA- 82

Query: 79  DAIDHQRLPKDLLDPKLCLAYR--IVVLSKRNNRLIVATADPSDQQAAEKIKFASQMGVD 136
            A D   LP   LD  L    +  +V +    + L +  ADP+D    + +  A+   V 
Sbjct: 83  -ARDAPELPPADLDLSLRFLKQQHVVPVQDGEHGLALLVADPADPYPLQAVALAAGRPVA 141

Query: 137 WVIAEYDKLSRMIEAAAVSAAETINSIV----GSEFEFDEVTADTSGDANEQAIAEVEDA 192
             +    ++  +IE    +    + +IV    GS  E D+V         E       +A
Sbjct: 142 LRVGLRSEIDGLIERYYGTGRSAMGTIVENLDGSAAEEDDV---------EHLRDLASEA 192

Query: 193 PVVRFLHKMLLDAVGMRASDIHFEPYEHNYRVRFRVDGELREIASPPTVIKDKLASRIKV 252
           PV+R ++ +L  AV  RASD+H EP+E+  +VR+R+DG L E+ +PP+     + SR+K+
Sbjct: 193 PVIRLVNLILQRAVEQRASDVHIEPFENRLKVRYRIDGVLHEVEAPPSSSTAAVISRVKI 252

Query: 253 ISRLDISEKRVPQDGRMKLKIGPDRVIDFRVSTLPTLFGEKIVVRILDPSSARLGIDALG 312
           ++RL+I+E+R+PQDGR++L++   + +D RVST+PT FGE +V+RILD  S      +LG
Sbjct: 253 MARLNIAERRLPQDGRIQLRV-QGKELDLRVSTVPTSFGESVVMRILDRESVVFDFASLG 311

Query: 313 YDADEKARLLHAIGRPYGMVLVTGPTGSGKTVSLYTCLNLLNQPGVNIATAEDPSEINLP 372
           +    + R +  + RP+G++LVTGPTGSGKT +LYT L+ +N   V I T EDP E  L 
Sbjct: 312 FTDRFQQRFVDVLERPHGILLVTGPTGSGKTTTLYTALSRINTNDVKIITVEDPVEYQLE 371

Query: 373 GVNQVNVNERAGLTFAAALRAFLRQDPDIIMVGEIRDLETADISIKAAQTGHLVLSTLHT 432
           G+NQ+ V  + GL F+ ALR+ +RQDPD+IM+GE+RDLET  I+I++A TGHLVLSTLHT
Sbjct: 372 GINQIQVKPQIGLDFSGALRSIMRQDPDVIMIGEMRDLETCRIAIQSALTGHLVLSTLHT 431

Query: 433 NDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCTVCRAPADVPREALLDAGFQEEQ 492
           N A   +TR+ +MG+  + + S++  I AQRL RRL      P D   E +      +  
Sbjct: 432 NSAAGGITRLLDMGVEDYLLGSTINGILAQRLVRRLDPETAMPYDALPEVIEQFELHKYT 491

Query: 493 LDGSWKPYRPVGCSACSGGYKGRVGIYQVMPISEAIQEIILRDGSALDIAQQSEREGVRS 552
            +   + ++P   +A   GY+GR  I + + +S+ ++ ++++  S  DI +Q+  EG+R+
Sbjct: 492 DERPIRLWKPGSNAANPSGYRGRRAIMEFLTMSDPLRRLVMQRASEGDIERQARSEGMRT 551

Query: 553 LRQSGLRKVMQGLTSLEEVVACTNE 577
           + + G+ K + G+T+LEEV+  T E
Sbjct: 552 MYEDGIAKAVAGITTLEEVLRVTQE 576