Pairwise Alignments

Query, 212 a.a., Homoserine/homoserine lactone efflux protein from Variovorax sp. SCN45

Subject, 210 a.a., putative transporter from Pseudomonas putida KT2440

 Score =  110 bits (274), Expect = 3e-29
 Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 4/211 (1%)

Query: 1   MTLATALLFAIVAFAAIATPGPTVLLALSNGSRHGVRRALPGMLGAVLSDFVLVGAVALG 60
           M++   L F    +    +PG   + ++S+G ++G  R     LG  L   + +  +A G
Sbjct: 1   MSMEVWLGFFAACWVISLSPGAGAIASMSSGLQYGFWRGYWNALGLQLGLIMQIAIIAAG 60

Query: 61  LGALLAASEFWFSMLKWVGAVYLAWLGLRMLRSKGGFQLPTADAAASVTAGESRRIFFKS 120
           +GA+LAAS   F ++KW G  YL +L  +  R+     +  +D +     G+   + F+ 
Sbjct: 61  VGAVLAASATAFQVIKWFGVGYLVYLAYKQWRA---LPMDMSDESGVRPIGKPLSLVFRG 117

Query: 121 FLVAVTNPKGYIFCSALLPQFIDPTAAQAPQYIVIALIFAALDMAVMLAYAFVGARAIRL 180
           FLV ++NPK  +F  A+LPQF++P A   PQY+ I +    +D+ VM  Y  + +  +R+
Sbjct: 118 FLVNISNPKALVFMLAVLPQFLNPHAPLLPQYVAITVTMVTVDLLVMAGYTGLASHVLRM 177

Query: 181 L-TVSATRWIDRACGGMLLALAGSLAFYRRS 210
           L T    + ++R   G+ +  A  LA  RR+
Sbjct: 178 LRTPKQQKRLNRTFAGLFIGAATFLATLRRA 208