Pairwise Alignments

Query, 1212 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 2e-44
 Identities = 108/341 (31%), Positives = 171/341 (50%), Gaps = 19/341 (5%)

Query: 712  HRETDRALQAAKQAADEAREVAEHAKLAAELAKQAADQANQAKSRYISAISHELRTPLNS 771
            H E   ++  A +   +  E  E   +  ++A++ A +A++ KS +++ +SHE+RTPLN 
Sbjct: 244  HEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNG 303

Query: 772  ILGYAQLMGEDQSVPPHRQQAVAVIKRGGEHLLSLIEGTLAIAHIEAGKLTLHARPMRFA 831
            ILG+  L+ + + + P +   +  I++  ++LL +I   L  + IEAGKL L + P    
Sbjct: 304  ILGFTHLLQKSE-MTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLR 362

Query: 832  DTLRELADMFELQAAEKGLQFRFEAAGPLPEVVRADEKRVLQILINLLGNAIKFTAAGQV 891
            D +++   +    A  K L+         P  +  D  R+ QIL NL+ NAIKFT  G +
Sbjct: 363  DLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREGTI 422

Query: 892  TLRLAYAREFAS-----VEIEDTGPGMPPEDIERIFEPFARGNAVGAAGASAAPGAGLGL 946
             +R     E        + ++DTG G+ P+D+  +F+ F++ +    + A    G GLGL
Sbjct: 423  VVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQAD---NSLARQPGGTGLGL 479

Query: 947  TIAKMLTDLMGGEMKVRSTPGEGSLFCVRLFLPRVHDTVGGIGRPLPVQRARRGYEGPRR 1006
             I+K L + MGGE+ V STPGEGS F + L LP+ HD    +  P P+           R
Sbjct: 480  VISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEAL-PPQPLL---------GR 529

Query: 1007 RLLVVDNEEADRDLLGHVLAPLGFELRSAASGHDALDLIAA 1047
            R  +VD  E  R  L H L   G  +   AS    L  + A
Sbjct: 530  RAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQA 570



 Score = 38.9 bits (89), Expect = 2e-06
 Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 26/148 (17%)

Query: 1005 RRRLLVVDNEEADRDLLGHVLAPLGFELRSAASGHDALDLIAAGYRPDAMFVDLAMPGID 1064
            R ++L VD+  A+  L+  +L  LG E+ +  +G+ A+  +      D + +D+ MPG+D
Sbjct: 667  RPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELF-DLVLMDVQMPGMD 725

Query: 1065 G---------WETIRRARKL---GLTEASVAIVSANAFDKGLDNDVGIAPEDFFVKPVRH 1112
            G         WE  +    L    LT  ++A         G+D        D+  KP+  
Sbjct: 726  GRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMD--------DYLTKPISE 777

Query: 1113 TELLDWLERRLGLQWTEAAAAKPVPAAA 1140
             +L      ++ ++WT  +   P  A A
Sbjct: 778  RQL-----AQVVMKWTGLSLGTPQQAQA 800