Pairwise Alignments

Query, 385 a.a., Outer membrane porin protein 32 precursor from Variovorax sp. SCN45

Subject, 375 a.a., porin, Gram-negative type from Variovorax sp. SCN45

 Score =  211 bits (538), Expect = 2e-59
 Identities = 156/413 (37%), Positives = 197/413 (47%), Gaps = 66/413 (15%)

Query: 1   MKKSLTAFA-ALAVCGLASAQSSVTLFGVVDAAVTYQSATSRDPVTGATIKSSKTSLGNS 59
           MK+ L   A  LA  G A AQSSVT+FGV+D  + Y        V          +L N 
Sbjct: 1   MKRFLMCSALGLAGAGAAHAQSSVTMFGVMDLGIQYTKGDGNGSVK---------ALSNG 51

Query: 60  GYNSSRIGFRGTEDLGGGLAASFWLEAPI---------------TNDDGATGISTFSRRS 104
           G ++SRIGFRGTEDLGGGL A FWLE  +               T+  G  G  TF R S
Sbjct: 52  GLSTSRIGFRGTEDLGGGLRAGFWLEGSLNPDLGTGRPSNSNNQTSGAGTAGPITFDRMS 111

Query: 105 TVSLSGG-FGELRLGRDYTPTFWNDTVFDPFGTNG---SGTNVISTVSGNTTINNANYVR 160
            VS+S    GELRLG D+ PT +N   FDPF  NG   +G    +TV    T      + 
Sbjct: 112 FVSISSDTLGELRLGHDFIPTHYNSIYFDPFNANGVARAGNLTFATVG---TGPLPTTIT 168

Query: 161 ASNSVGYFLPPNLGGFYGQLQYAFDENTSTSATSTTAATSSNAGRYVGGRFGYANGPLDV 220
            SN+V Y+LPP LGG YG       EN ST       A + + G + G R G+A+G  D+
Sbjct: 169 GSNTVSYWLPPKLGGLYGMAMVGTGENDST-------ALNRDDGNFAGARLGFASGAFDI 221

Query: 221 ALGVGQSIAVDTTTLERKVQTINLGASYDFGPVKLFGELSNVKNKF--DTALTNTHDSYN 278
           A  + +S    T T+       N+GAS+D G  K F   + V+      T   NT +   
Sbjct: 222 AAAITRSHFNSTATIGNYTHA-NIGASWDAGFAKFFALYNTVRVNIVAGTVRKNTAE--- 277

Query: 279 GYLIGATVPV-GAGLIRASYSQVRYN-----EGAAGVTGEDPLARKLAIGYVHNLSKRTA 332
              IGA +P    G IR SY+ +          A G+      AR+  IGYVHNLSKRTA
Sbjct: 278 ---IGAHIPAFEVGRIRISYAYLDDRSDDSVRNADGMPRNRDDARQFGIGYVHNLSKRTA 334

Query: 333 LYATIARVNNRNDVNYTGSLVSASTTGYGSTGVTYTGLPRSSTGYDFGIRHAF 385
           LY T AR+ N     Y  S   A   G            + STG++FG+RH F
Sbjct: 335 LYGTYARLMNSGQARYVVSGGVAPAAG------------QRSTGWEFGVRHLF 375