Pairwise Alignments

Query, 230 a.a., Transcriptional regulator RutR of pyrimidine catabolism (TetR family) from Variovorax sp. SCN45

Subject, 212 a.a., HTH-type transcriptional regulator RutR from Escherichia coli ECRC62

 Score =  138 bits (348), Expect = 7e-38
 Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 5/202 (2%)

Query: 8   AVKRQARRQNIESA----ILAVAQERFALQGYGGVSIDDIAAEAGISKQSLLYYFPSKKA 63
           AVK   +R    SA    IL+ A + F+  G+ G  ++ IA  AG+SK +LLYYFPSK+A
Sbjct: 5   AVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEA 64

Query: 64  LYRRVFNDVLDSWLSNLDSLAAADLEPHAALERYVTQKLQFSYDHPSGSRLFAQEIISQA 123
           LY  V   +LD WL+ L +    D  P AA++ Y+  KL+ S D+P  SRLF  E+++ A
Sbjct: 65  LYIAVLRQILDIWLAPLKAFRE-DFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGA 123

Query: 124 PQCGDDIEAKLVPAFRAEAAVLHRWMSTGHAAPLPVAHLLFTLWAMTQTYADFAWQMRML 183
           P   D++   L      ++A++  W+ +G  AP+   HL+F +WA TQ YADFA Q+  +
Sbjct: 124 PLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAV 183

Query: 184 LGKKALEPADFDLARETIMRML 205
            G    +   F+   E + R++
Sbjct: 184 TGATLRDEVFFNQTVENVQRII 205