Pairwise Alignments

Query, 436 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) from Variovorax sp. SCN45

Subject, 424 a.a., Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) from Pseudomonas simiae WCS417

 Score =  583 bits (1502), Expect = e-171
 Identities = 280/433 (64%), Positives = 329/433 (75%), Gaps = 14/433 (3%)

Query: 1   MADLSIDFVGIRSPNPFWLASAPPTDKEINVVRAFEAGWGGVVWKTVGEDPNVVNVHGPR 60
           MADLSI F GI++PNPFWLASAPPTDK  NVVRAFEAGWGGVVWKT+GEDP  VNV   R
Sbjct: 1   MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAVNVSS-R 59

Query: 61  YAVSYAADRRVTGFNNIELISDRPLRTNLEEMTRVKRNWPDRALVASVMVPCTEESWKNI 120
           Y+  Y  +R V G NNIELI+DR L  NL E+T+VK++WPDRAL+ S+MVPC EESWK I
Sbjct: 60  YSAHYGPNREVMGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEESWKTI 119

Query: 121 LPMIEDTGCDGLELNFGCPHGMSERGMGAAVGQVPEYIQMVAEWCKHYSKLPLIVKLTPN 180
           LP++E TGCDG+ELNFGCPHGM ERGMGAAVGQVPEY++ V  WCK Y  LP+IVKLTPN
Sbjct: 120 LPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKLTPN 179

Query: 181 VADIRPAARAAKKGGADAVSLINTINSIMGVDLDAMAMFPNTGGMGSHGGYCGPGAKPIA 240
           + DIR AARAA +GGADAVSLINTINSI  VDL+ M   P  G   +HGGYCG   KPIA
Sbjct: 180 ITDIRVAARAAYRGGADAVSLINTINSITSVDLERMVALPVVGTQSTHGGYCGSAVKPIA 239

Query: 241 LHMVAEIARDPQTAGLPISGIGGVSTWRDAAEFIALGSGSVQVCTAAMVYGFKIVQDLCD 300
           L+MVAEIARDPQT GLPI GIGG+  WRDAAEF+ALG G+VQVCTAAM++GF+IV+++ D
Sbjct: 240 LNMVAEIARDPQTQGLPICGIGGIGNWRDAAEFVALGCGAVQVCTAAMLHGFRIVEEMKD 299

Query: 301 GLSNFMDEKGYQNLEQLRGRAIGSITDWKELNLNHVDKAVIHQDACIQCGRCHVVCEDTS 360
           GLS +MD +GY +L+   GRA+G+ TDWK L++N+   A I Q+ACI CGRCH+ CEDTS
Sbjct: 300 GLSRWMDSQGYNSLQDFSGRAVGNTTDWKYLDINYQVIAKIDQEACIGCGRCHIACEDTS 359

Query: 361 HQAITATK--DGMRYFEVKEEECVGCNLCVSICPVPGALSMRTLKPGEVDARTGHPVVAQ 418
           HQAI + K  DG   +EV ++ECVGCNLC   CPV   + M       V   TG P    
Sbjct: 360 HQAIASLKQADGTHKYEVIDDECVGCNLCQITCPVADCIEM-------VPMDTGKP---- 408

Query: 419 YANWTTHPNNPMR 431
           + NWT  P NP R
Sbjct: 409 FLNWTQDPRNPYR 421