Pairwise Alignments

Query, 436 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) from Variovorax sp. SCN45

Subject, 424 a.a., Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) from Pseudomonas putida KT2440

 Score =  580 bits (1496), Expect = e-170
 Identities = 280/433 (64%), Positives = 328/433 (75%), Gaps = 14/433 (3%)

Query: 1   MADLSIDFVGIRSPNPFWLASAPPTDKEINVVRAFEAGWGGVVWKTVGEDPNVVNVHGPR 60
           MADLSI F GI++PNPFWLASAPPTDK  NVVRAFEAGWGGVVWKT+GEDP  VNV   R
Sbjct: 1   MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAVNVSS-R 59

Query: 61  YAVSYAADRRVTGFNNIELISDRPLRTNLEEMTRVKRNWPDRALVASVMVPCTEESWKNI 120
           Y+  Y  +R+V G NNIELI+DR L  NL E+T+VK++WPDRAL+ S+MVPC EESWK I
Sbjct: 60  YSAHYGPNRQVQGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCIEESWKFI 119

Query: 121 LPMIEDTGCDGLELNFGCPHGMSERGMGAAVGQVPEYIQMVAEWCKHYSKLPLIVKLTPN 180
           LP++E TG DG+ELNFGCPHGM ERGMGAAVGQVPEY++MV  WCK Y  LP+IVKLTPN
Sbjct: 120 LPLVEATGADGIELNFGCPHGMPERGMGAAVGQVPEYVEMVTRWCKTYCALPVIVKLTPN 179

Query: 181 VADIRPAARAAKKGGADAVSLINTINSIMGVDLDAMAMFPNTGGMGSHGGYCGPGAKPIA 240
           + DIR +ARAA +GGADAVSLINTINSI  VDLD M   P  G   +HGGYCG   KPIA
Sbjct: 180 ITDIRQSARAAHRGGADAVSLINTINSITSVDLDRMVAHPIVGDQSTHGGYCGSAVKPIA 239

Query: 241 LHMVAEIARDPQTAGLPISGIGGVSTWRDAAEFIALGSGSVQVCTAAMVYGFKIVQDLCD 300
           L+MVAEIARDP+T GLPI GIGG+  WRDAAEF+ALGSG+VQVCTAAM++GF+IV+D+ D
Sbjct: 240 LNMVAEIARDPETRGLPICGIGGIGNWRDAAEFMALGSGAVQVCTAAMLHGFRIVEDMQD 299

Query: 301 GLSNFMDEKGYQNLEQLRGRAIGSITDWKELNLNHVDKAVIHQDACIQCGRCHVVCEDTS 360
           GL+ +MD+ G+  +E  RG+A+G  TDWK L++N+   A I Q+ACI CGRCH+ CEDTS
Sbjct: 300 GLARWMDQHGHATVEAFRGQAVGHTTDWKYLDINYKSVAHIDQEACIGCGRCHIACEDTS 359

Query: 361 HQAITAT--KDGMRYFEVKEEECVGCNLCVSICPVPGALSMRTLKPGEVDARTGHPVVAQ 418
           HQAI +T   DG   + V EEECVGCNLC   CPV   + M           TG P    
Sbjct: 360 HQAIASTLKADGTHAYSVIEEECVGCNLCQITCPVENCIEMEA-------QDTGKP---- 408

Query: 419 YANWTTHPNNPMR 431
           Y NWT  P NP R
Sbjct: 409 YLNWTQDPRNPYR 421