Pairwise Alignments

Query, 405 a.a., Acyl-CoA dehydrogenase from Variovorax sp. SCN45

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  157 bits (396), Expect = 6e-43
 Identities = 115/340 (33%), Positives = 170/340 (50%), Gaps = 12/340 (3%)

Query: 60  ERGLWNLFLPEAEHGPGLTNVEYA-PLCEIMGRRYWCAEIFNCSAPDTGNMEVLARYGTK 118
           E GL+ + +PE   G     V YA  L EI      C+ I   S  ++     + R+G +
Sbjct: 45  ELGLFGMLVPEQWGGSDTGYVAYAMALEEIAAGDGACSTIM--SVHNSVGCVPILRFGNE 102

Query: 119 AQQERWLKPLLAGEIRSSFAMTEPEVASSDATNIRCSIRREGDEYVINGRKWYITGAMHE 178
            Q+E++L PL  G +  +FA+TEP+ A SDA++++   R EGD YV+NG K +IT    +
Sbjct: 103 QQKEQFLTPLATGAMLGAFALTEPQ-AGSDASSLKTRARLEGDHYVLNGSKQFITSG--Q 159

Query: 179 RCEIFVLMGKTDPDNADRHKQQSMILVPKNTPGVTIVRDMQLLGMYDPPFGHPEIVFDNV 238
              + ++   TDP+   R    S  +VP ++PG  + R    LG +       +IVFDNV
Sbjct: 160 NAGVVIVFAVTDPEAGKRGI--SAFIVPTDSPGYQVARVEDKLGQHASDTC--QIVFDNV 215

Query: 239 RVPVENILLGEGRGFEIAQGRLGPGRIHHCMRAIGMAESALEMMCQRLVSRTAFHKPLSE 298
           +VPV N L  EG G++IA   L  GRI    +A+GMA +A E+       R +F KPL E
Sbjct: 216 QVPVANRLGAEGEGYKIALANLEGGRIGIASQAVGMARAAFEVARDYANERQSFGKPLIE 275

Query: 299 QGVWRERIAESRMLIEQSRWMVLNAAYRMDTVGNKVAAKEIAMIKVLTPNNCVKVIDWAM 358
                 R+A+    I  +R MVL+AA   D    + A  E +M K+       KV   A+
Sbjct: 276 HQAVAFRLADMATKISVARQMVLHAAALRD--AGRPALVEASMAKLFASEMAEKVCSDAL 333

Query: 359 QAFGAMGLSQDTLLTHFYAYERHLRVADGPDEVHRNAIAK 398
           Q  G  G   D  L   Y   R  ++ +G  ++ R  IA+
Sbjct: 334 QTLGGYGYLSDFPLERIYRDVRVCQIYEGTSDIQRMVIAR 373