Pairwise Alignments

Query, 1042 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1030 a.a., acriflavine resistance protein B from Pseudomonas simiae WCS417

 Score =  995 bits (2572), Expect = 0.0
 Identities = 525/1027 (51%), Positives = 703/1027 (68%), Gaps = 10/1027 (0%)

Query: 5    FFIHRPVFAWVIAILIMLAGGVAIRTLPVSQYPDIAPPTVVVSANYPGASAQAVENSVTQ 64
            FFI RP+FAWV+A+ I+LAG +AI  LPV+QYP++APP V + A YPGASAQ ++ SV  
Sbjct: 4    FFIDRPIFAWVVALFILLAGLLAIPQLPVAQYPNVAPPKVEIYAVYPGASAQTLDESVVS 63

Query: 65   VLEQQLKGIDGLLYFKSTSSSAGYADISVTFRQGIDPDTAQVQVQNKVSQATSRLPQAVQ 124
            ++EQ+L G D LLYF+S  SS G A I+ TF+ G +P+ AQV VQN++     RLPQAV 
Sbjct: 64   LIEQELNGADHLLYFES-QSSLGSATITATFQPGTNPEMAQVDVQNRLKAVEPRLPQAVT 122

Query: 125  QQGVTVYKSQNNFLLIVALYDETDRRTDTDVADWMASNLRDPVSRVDGVGSVQAFGAAYA 184
            QQG+ V K    FLL+V L     +  D  ++D++A N+ + + R+DGVG  Q +GA  A
Sbjct: 123  QQGLQVEKVSAGFLLLVTLTSNDGKLDDVALSDYLARNVMNELKRLDGVGKAQLYGAERA 182

Query: 185  MRIWLDPHRLASYQLMPSDITAAITAQNTQVSVGEIGARPSPAGQQLNATVTALSRLQTP 244
            MR+W+DP +L  + L P+D+ AAI+AQN QVS G IG  P    Q++ A +    +L TP
Sbjct: 183  MRVWIDPQKLIGFNLTPADVNAAISAQNAQVSAGSIGDLPGTNTQEITAAILVKGQLSTP 242

Query: 245  EQFRGIVLKTQADGAVVRLGDVARVEIGNESYAETTRLNGHPAAGAAIMLAPGANALTTA 304
             +F  IVLK   DG+ VR+GDVARVE+G++ Y  +TRLNG P+   ++ L+PGANAL TA
Sbjct: 243  AEFADIVLKANPDGSTVRIGDVARVEVGSQEYQFSTRLNGKPSTAVSVQLSPGANALNTA 302

Query: 305  KAVKARIAEMEPSLPPGLRVAYAEDTTRFVKISIQSVLKTLLEAIALVVVVMYLFLQNWR 364
              V+A++ E+    P  +      DT+ FVK+SI  V+ TLLEA+ALV  VM+LFLQN R
Sbjct: 303  TLVRAKMDELSRYFPANVEYKIPYDTSPFVKVSITKVVYTLLEAMALVFAVMFLFLQNVR 362

Query: 365  ATVIPAITVPVVLLGTFGVLAAFGYSINVLTLFGMVLAIGLLVDDAIVVVENVERVMHEE 424
             T+IP + VP+ L+GTF  +   G+SINVLT+FGMVLAIG+LVDDAIVVVENVER+M  E
Sbjct: 363  YTLIPTLVVPIALMGTFATMLLLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMATE 422

Query: 425  GLDAKAATIKSMKEITGALIGIALVVSAVFLPMTFFGGSVGVIYRQFSVTIIASMALSVV 484
            GL  K AT K+M +ITGA+IGI LV+ AVFLPM F  GSVGVIY+QFS+++  S+  S  
Sbjct: 423  GLSPKEATKKAMGQITGAIIGITLVLVAVFLPMAFMAGSVGVIYQQFSLSMATSILFSAF 482

Query: 485  VAIVLIPALCARFLKP---GVPPRTRGFLGAFNRRFDAAQGRYVGLLGRILRKPLRFTAV 541
            +A+ L PALCA  LKP   G      GF G FN RF+    RY G +   L++  R+  +
Sbjct: 483  LALTLTPALCATLLKPIAKGEHHAKGGFFGWFNTRFEQLTDRYEGWVAYALKRSGRYLLI 542

Query: 542  YAAIVAGMGLLYLGLPGGFLPEEDQGSVMVQVSLPAGATQGRTDAVNRAVEKHFLETEKD 601
            Y  ++ G+G ++  LP  FLP EDQG  +  + LP GA++ RT  V   +E H  E E  
Sbjct: 543  YLVLLVGLGWMFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVAEQIEAHNAE-EPG 601

Query: 602  TTDTIFTLAGWSYAGSGQHTGMAFVSLKDWSERKDPQKRAQAIVERASAALSKQQRDAEV 661
              DT   + G+S++GSGQ+  +AF +LKDWSER      A +I +RA+ A S + +DA  
Sbjct: 602  VGDTTM-IMGFSFSGSGQNAALAFTTLKDWSERSSDDS-ASSIADRANMAFS-ELKDAIA 658

Query: 662  YGMVPPPIEGLGQSNGFEFWLQDTSGMGADKLVQKREALVRDANKDKRLQSVRANSIANT 721
            Y ++PPP++GLG S+GFEF LQD  G+G   L+  R  L+  A K   L +VR +++A  
Sbjct: 659  YAVLPPPVDGLGTSSGFEFRLQDRGGVGHAALMAARTELLAAAEKSPILANVRESALAEA 718

Query: 722  PQLQVDIDQVKASALRLSLDDVNTTLGIAWGGNYVNDFIDRGRVKRVYVQADAPYRSAPE 781
            PQ+Q+++D+ +A+AL +S  DV   L  A G  Y+NDF ++GR++RV VQA+   RS   
Sbjct: 719  PQVQLEVDRKQANALGVSFADVGNVLSSAIGSAYINDFPNQGRMQRVVVQAEGDQRSQVA 778

Query: 782  DMGQWFVRGSTGAMTPFSAFATTRWSQGASQLERYNGLPAVQIQGTAAHGTSSGTAMSAV 841
            D+ +  VR + G M P SAF   +W+QG +QL RYNG PA+ I G AA G S+G AM  +
Sbjct: 779  DLMKINVRNNAGKMVPLSAFVEAKWTQGPTQLTRYNGYPAIAISGEAAPGHSTGEAMDEI 838

Query: 842  E-AVARKQTGTGHAWSGLSYQERLSGGQAPLLFAVSILVVFLCLAALYESWSVPFSVMLV 900
            +  V++   G G  W+GLS QERLSG QAPLL  +S+L+VFLCLAALYESWS+P SV+LV
Sbjct: 839  QRLVSQLPAGLGQEWTGLSLQERLSGAQAPLLLGLSLLIVFLCLAALYESWSIPTSVLLV 898

Query: 901  IPLGVLGAVIAASLRGLSNDIYFQVGLLATIGLSAKNAILIIEFAEAALRRGVPLLDAVA 960
            +PLGVLGAVIA  LRG+ ND++F+VGL+  IGLSAKNAILIIEFA+    +G  L+ A  
Sbjct: 899  VPLGVLGAVIAVGLRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKDLYDQGEDLVTATL 958

Query: 961  EGARLRLRPILMTSLAFLAGVVPLALATGAGSASQVAIGTGVFGGVLAATALGIFFVPLF 1020
            + ARLRLRPI+MTSLAF+ GVVPLA+ATGA SASQ AIGTGV GG++ AT L + FVP+F
Sbjct: 959  KAARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITAT-LAVVFVPVF 1017

Query: 1021 YLLVKRL 1027
            +++V +L
Sbjct: 1018 FVVVMKL 1024