Pairwise Alignments

Query, 1042 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1031 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Enterobacter asburiae PDN3

 Score =  918 bits (2373), Expect = 0.0
 Identities = 493/1026 (48%), Positives = 673/1026 (65%), Gaps = 8/1026 (0%)

Query: 4    NFFIHRPVFAWVIAILIMLAGGVAIRTLPVSQYPDIAPPTVVVSANYPGASAQAVENSVT 63
            +FFI RPVFAWV+A+ I+LAG ++I  LPV+QYP +APP +++S +YPGAS   +  SV 
Sbjct: 3    HFFIERPVFAWVVALFIVLAGLLSIPRLPVAQYPAVAPPGIIISVSYPGASPDIMNTSVV 62

Query: 64   QVLEQQLKGIDGLLYFKSTSSSAGYADISVTFRQGIDPDTAQVQVQNKVSQATSRLPQAV 123
             ++E+++ G+D LLYF+S+S + G A I+VTF+ G D   AQ+ +QN++     RLPQAV
Sbjct: 63   SLIEREISGVDNLLYFESSSDTTGSASITVTFKPGTDIKLAQMDLQNQIKIVEPRLPQAV 122

Query: 124  QQQGVTVYKSQNNFLLIVALYDETDRRTDTDVADWMASNLRDPVSRVDGVGSVQAFGAAY 183
            +Q G+ V  + + FL++V L   T +  + D++D+ A N+ D + RV GVG VQ FG   
Sbjct: 123  RQNGINVEAANSGFLMMVGLKSATGQFEEADLSDYFARNVSDELRRVPGVGKVQLFGGEK 182

Query: 184  AMRIWLDPHRLASYQLMPSDITAAITAQNTQVSVGEIGARPSPAGQQLNATVTALSRLQT 243
            A+RIWLDP +L  Y L  SD+  A+  QN  VS G+ G  P+ AGQ +   +T   +L +
Sbjct: 183  ALRIWLDPMKLHGYGLSVSDVLTAVGQQNALVSPGKTGDEPASAGQGVTYPITVKGQLSS 242

Query: 244  PEQFRGIVLKTQADGAVVRLGDVARVEIGNESYAETTRLNGHPAAGAAIMLAPGANALTT 303
             E FR I LK+ A GA ++L D+ARVE G +SYA   R NG PA  AAI L+PGANA++T
Sbjct: 243  VEAFRNITLKSDASGARLKLSDIARVESGLQSYAFGIRENGVPATAAAIQLSPGANAMST 302

Query: 304  AKAVKARIAEMEPSLPPGLRVAYAEDTTRFVKISIQSVLKTLLEAIALVVVVMYLFLQNW 363
            A  V+ARI E+   LP G+      DT  FVK+SI  V++T +EA+ LV +VM LFL   
Sbjct: 303  ASGVRARIDELSRVLPEGMAFTIPFDTAPFVKLSIMKVVQTFVEAMVLVFLVMLLFLHKI 362

Query: 364  RATVIPAITVPVVLLGTFGVLAAFGYSINVLTLFGMVLAIGLLVDDAIVVVENVERVMHE 423
            R T+IPAI  PV LLGTF V+   GYSIN+LT+FGMVLAIG++VDDAIVVVENVER+M E
Sbjct: 363  RCTLIPAIVAPVALLGTFTVMLLSGYSINILTMFGMVLAIGIIVDDAIVVVENVERLMEE 422

Query: 424  EGLDAKAATIKSMKEITGALIGIALVVSAVFLPMTFFGGSVGVIYRQFSVTIIASMALSV 483
            + L  + AT ++M+EIT A+IGI LV++AVF+PM F  GSVG+IYRQF +++  S+ LS 
Sbjct: 423  KSLSPRDATRQAMQEITPAIIGITLVLTAVFIPMGFAEGSVGIIYRQFCISMAVSILLSA 482

Query: 484  VVAIVLIPALCARFLKPGVPPRTRG--FLGAFNRRFDAAQGRYVGLLGRILRKPLRFTAV 541
             +A+ L PALCA  LKP    ++ G  F   FN RF A    Y   LG +L++  R   +
Sbjct: 483  FLALTLTPALCATLLKPHQAGKSGGGRFAVGFNARFRALTACYEAGLGAVLKRTGRMLLL 542

Query: 542  YAAIVAGMGLLYLGLPGGFLPEEDQGSVMVQVSLPAGATQGRTDAVNRAVEKHFLETEKD 601
            YAA+ A + L    LP  FLP+EDQG  M  + LP+ AT  RT  V +  E+  +    D
Sbjct: 543  YAALCAALFLGLSSLPSSFLPDEDQGYFMSSIQLPSDATMQRTLNVVKKFEEE-IAARPD 601

Query: 602  TTDTIFTLAGWSYAGSGQHTGMAFVSLKDWSERKDPQKRAQAIVERASAALSKQQRDAEV 661
                I  L G+ ++GSG ++ MAF +LKDW +R+    + +A   +AS A      DA  
Sbjct: 602  IESNIMIL-GFGFSGSGPNSAMAFTTLKDWKDRQGSTAQGEADQIQASMA---DVSDAVT 657

Query: 662  YGMVPPPIEGLGQSNGFEFWLQDTSGMGADKLVQKREALVRDANKDKRLQSVRANSIANT 721
              ++PP I  +G S+GF +++QD +G+G + L +  +ALV  AN+   L  V  + +   
Sbjct: 658  MSLLPPAISDMGTSSGFTWYVQDRAGLGYEALKRAADALVLQANQRPELSDVYIDGLPEG 717

Query: 722  PQLQVDIDQVKASALRLSLDDVNTTLGIAWGGNYVNDFIDRGRVKRVYVQADAPYRSAPE 781
              L + +D+ KA A+ +S D++N TL +  G NYVND+ + GRV++V +QADAPYR  PE
Sbjct: 718  TSLALQVDREKAEAMGVSFDEINQTLSVTLGSNYVNDYTNSGRVQQVIIQADAPYRMQPE 777

Query: 782  DMGQWFVRGSTGAMTPFSAFATTRWSQGASQLERYNGLPAVQIQGTAAHGTSSGTAMSAV 841
             +    V+   G M P S FAT  W     QL RY G  A++I G+AA G SSGTAM  +
Sbjct: 778  QILTLSVKNRMGQMVPVSTFATLSWHVAPQQLTRYQGYSAIRITGSAAPGASSGTAMKVM 837

Query: 842  EAVARK-QTGTGHAWSGLSYQERLSGGQAPLLFAVSILVVFLCLAALYESWSVPFSVMLV 900
            E+++R    G    W+G S QER S  Q P L  +SILVVF+ LAALYESWS+PF+VMLV
Sbjct: 838  ESLSRDLPLGMAGEWAGSSLQERKSESQLPGLIVLSILVVFMVLAALYESWSIPFAVMLV 897

Query: 901  IPLGVLGAVIAASLRGLSNDIYFQVGLLATIGLSAKNAILIIEFAEAALRRGVPLLDAVA 960
            +PLG++GAVIA S+  ++ND++F+VGL+  IGLSAKNAILI+EFA    R+G PLL A  
Sbjct: 898  VPLGLIGAVIAVSVADMTNDVFFKVGLITLIGLSAKNAILIVEFARQLHRQGQPLLAATI 957

Query: 961  EGARLRLRPILMTSLAFLAGVVPLALATGAGSASQVAIGTGVFGGVLAATALGIFFVPLF 1020
              A  RLRPILMTSLAF  GVVPL LA GA  ++Q AIGTGVFGG+++ T L IFFVP+F
Sbjct: 958  HAAGQRLRPILMTSLAFTLGVVPLMLARGASDSTQHAIGTGVFGGMISGTLLAIFFVPVF 1017

Query: 1021 YLLVKR 1026
            ++++ R
Sbjct: 1018 FIVIAR 1023