Pairwise Alignments

Query, 158 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 191 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 69.3 bits (168), Expect = 3e-17
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 14  TRKAGDGDTAADVVQEAYARVLIHQDGGGTVLEPRAFLYQTGRNVLANQAARRAAETRML 73
           +R+ G   TA+D+VQE + R     +     L+   +L +   N+  +     ++  R+ 
Sbjct: 37  SRRVGCRATASDLVQELFLRFWRRPEVKVEALD--TYLLRCAGNLAIDHLRSESSRERVA 94

Query: 74  DTLALVSDHS-APSVERHVGARQQLDRLVALLEDMPRKRRNAFILVRIHGLSYAQTAAHM 132
           +    VS+ S A + E+ V     L R+ A L  +P + R  F+L RIHG  Y++ A  M
Sbjct: 95  EAAVPVSEASLAQAPEQAVEVDHDLQRIEATLRALPERTRQIFLLNRIHGCKYSEIAKAM 154

Query: 133 EISEKAVERHMTRALLDC 150
           ++S+ AVE+HM RAL  C
Sbjct: 155 QLSQSAVEKHMMRALEAC 172