Pairwise Alignments

Query, 158 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 158 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score = 85.5 bits (210), Expect = 4e-22
 Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 2/150 (1%)

Query: 2   LERYYRELLRYFTRKAGDGDTAADVVQEAYARVLIHQDGGGTVLEPRAFLYQTGRNVLAN 61
           +E YYREL+ + + + G    A DV  +AY RVL  + G   +  PRAFLY+T  N++ +
Sbjct: 1   MEHYYRELVSFLSARLGSRQAAEDVAHDAYLRVL-ERTGSEQIEHPRAFLYRTALNLVVD 59

Query: 62  QAARRAA-ETRMLDTLALVSDHSAPSVERHVGARQQLDRLVALLEDMPRKRRNAFILVRI 120
           +  R+   +   LD L   S   +  ++  +   Q+L  +   L+++ R  R++F+L +I
Sbjct: 60  RHRRQLVRQAEPLDALDADSRLHSSELQHDLQLDQRLALMQKALDELSRPCRDSFLLRKI 119

Query: 121 HGLSYAQTAAHMEISEKAVERHMTRALLDC 150
            GLS+ Q A  + IS   VE+H+  A+  C
Sbjct: 120 EGLSHQQIAERLGISRSLVEKHIVNAMKHC 149