Pairwise Alignments

Query, 158 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 170 a.a., RNA polymerase, sigma 19 factor from Pseudomonas putida KT2440

 Score = 77.8 bits (190), Expect = 8e-20
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 2   LERYYRE----LLRYFTRKAGDGDTAADVVQEAYARVLIHQDGGGTVLEPRAFLYQTGRN 57
           L   YRE    L  +  R+ G+   AAD+ Q+ + R+L        + EPRA+L   G+ 
Sbjct: 12  LPALYREHRGWLEAWLRRRMGNAWDAADLSQDTFLRILASAQPLADIREPRAYLLTVGKR 71

Query: 58  VLANQAARRAAETRMLDTLALVSDHSAPSVERHVGARQQLDRLVALLEDMPRKRRNAFIL 117
           +L+N   RR+ E   LD LA + +   PS E+     + L  L  LL+ +    R AF+ 
Sbjct: 72  LLSNFHQRRSLEQAYLDALAQLPEQHVPSPEQRWVLLETLQALDELLDGLKPAIRKAFLW 131

Query: 118 VRIHGLSYAQTAAHMEISEKAVERHMTRALLDC 150
            ++ GL YA+    + + +++V+R+M +A   C
Sbjct: 132 SQLEGLGYAEIGQRLGVCQRSVKRYMAQAYEHC 164