Pairwise Alignments

Query, 158 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 168 a.a., putative RNA polymerase sigma-70 factor from Pseudomonas putida KT2440

 Score = 73.9 bits (180), Expect = 1e-18
 Identities = 43/136 (31%), Positives = 70/136 (51%)

Query: 15  RKAGDGDTAADVVQEAYARVLIHQDGGGTVLEPRAFLYQTGRNVLANQAARRAAETRMLD 74
           RK G+   AAD+  + + R+L  Q       EPRA L    + ++ ++  R+  E   L+
Sbjct: 29  RKLGNACDAADLAHDTFVRLLSRQGNPYFGNEPRALLTHIAKGLVVDRWRRQDVERAYLE 88

Query: 75  TLALVSDHSAPSVERHVGARQQLDRLVALLEDMPRKRRNAFILVRIHGLSYAQTAAHMEI 134
            +A +     PS E      + L R+ A+L DMP + R  F+L ++ GL+YAQ A  +++
Sbjct: 89  AIAHLPQPEVPSPETRWLILETLYRIDAMLRDMPARVRQVFLLSQLDGLTYAQIAEQLQV 148

Query: 135 SEKAVERHMTRALLDC 150
           S   ++R M  A L C
Sbjct: 149 SLITIKRDMRTAFLAC 164