Pairwise Alignments

Query, 330 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

Subject, 314 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  187 bits (476), Expect = 2e-52
 Identities = 118/310 (38%), Positives = 161/310 (51%), Gaps = 15/310 (4%)

Query: 18  AAQWFFLMQSGEATSADRMRWTQWREADPSHEAAWQRAEQVSRKFGMLPGRLSMPTLGRT 77
           AA+W  L+ SG+A+ +D  R  QWR +   HE AWQ+A  +  +F  LPG L+M  L R 
Sbjct: 15  AARWLALLDSGDASESDLQRLAQWRASSHLHEDAWQKASLLRARFAGLPGALAMAALDRP 74

Query: 78  VRADRRVAVKTLALLLTAAPAGWLAWRVSPAREWLADHRTATGERRELRLPDGTRIQLNT 137
             A RR  +K    +    P  WL  R  P   W AD RTA GERR+  L DGT +QLNT
Sbjct: 75  -DAGRRALLKQALGVTALLPVAWLVSRELPLDAWTADMRTAVGERRQALLSDGTLLQLNT 133

Query: 138 ATAVDLAYDAKLRLVRLRAGEILIDTAPDAVASSDPAYRPFVVETAQGRLKALGTRFVVR 197
            +AVD+   A    V L  GE+ +    +   +    Y   V+   +  L+ L       
Sbjct: 134 DSAVDIELGAGR--VALLRGEVAVSVPANLSLTLQVPYGRVVLSEGEACLRLL------- 184

Query: 198 QHEDRRSHVAVLEGAVELRPDDARGLAMVLRAGEQAGFSDSAIDAVTPVGPEADDWSRGV 257
              D    V+ ++GAV L+P   RG A++L+ G+QA    + +  V         W  G 
Sbjct: 185 ---DEACRVSAIKGAVSLQP--LRGPAVMLQDGQQASLQAAGVGPVKAFDAWQLGWREGA 239

Query: 258 LRARNMRLQDFLAELGRYRPGVLRCDPAVADLRVSGVFQLNDTGPVLDSLPQALPVDVLY 317
           LR  +  L + L EL RYRPGVLR  P +  LRV+G F+L+DT  VL  L  +LP+ V  
Sbjct: 240 LRLDDRPLGELLHELRRYRPGVLRWAPELERLRVTGTFRLDDTDRVLALLAASLPLQVQT 299

Query: 318 RTRYWVTVVA 327
           RTRYWV++ A
Sbjct: 300 RTRYWVSLTA 309