Pairwise Alignments

Query, 330 a.a., Fe2+-dicitrate sensor, membrane component from Variovorax sp. SCN45

Subject, 318 a.a., putative transmembrane sensor from Pseudomonas putida KT2440

 Score =  180 bits (456), Expect = 5e-50
 Identities = 115/319 (36%), Positives = 167/319 (52%), Gaps = 15/319 (4%)

Query: 11  DEAVAMQAAQWFFLMQSGEATSADRMRWTQWREADPSHEAAWQRAEQVSRKFGM--LPGR 68
           D     QA QW   ++      A + +  QWR +   +E AWQR   + +   +  +PG 
Sbjct: 7   DTKTVRQAIQWMLRLRESGHDPALQQQCAQWRSSHHENEQAWQRMVHLHKDLDLRAIPGA 66

Query: 69  -LSMPTLGRTV-RADRRVAVKTLALLLTAAPAGWLAWRVSPAREWLADHRTATGERRELR 126
            L++ TL  +  R  RR A+K L  ++ A  A WLA  +     W +D+ T TGERR   
Sbjct: 67  GLALQTLETSQQRLRRRQALKLLGGVVMAGSASWLAKDLDTVSAWTSDYATGTGERRVFT 126

Query: 127 LPDGTRIQLNTATAVDLAYDAKLRLVRLRAGEILIDTAPDAVASSDPAYRPFVVETAQGR 186
           LPDG+ +QLNT +AVDLA+  + RLVRL+ GE++I+  P           P +VET    
Sbjct: 127 LPDGSLMQLNTCSAVDLAFHDQQRLVRLKLGELMINCNP---------RHPLLVETRDAL 177

Query: 187 LKALGTRFVVRQHEDRRSHVAVLEGAVELRPDDARGLAMVLRAGEQAGFSDSAIDAVTPV 246
           L+    RFV  Q  D  + V+V  G V +    A G    +  G+           +  +
Sbjct: 178 LEGFEGRFVAYQDSD-CTRVSVSHGKVAIHRPGA-GQLQWIEGGQNWRLDAQGAHRLAHM 235

Query: 247 GPEADDWSRGVLRARNMRLQDFLAELGRYRPGVLRCDPAVADLRVSGVFQLNDTGPVLDS 306
             +A  W+ G++  ++MRL +FLA++ RYR G L C   +ADLR+SGVF+L D   +L  
Sbjct: 236 DMDAMAWTEGLIVTQDMRLSNFLAQVSRYRHGYLGCSNEIADLRLSGVFRLEDPEQLLRL 295

Query: 307 LPQALPVDVLYRTRYWVTV 325
           LPQ LPV +  RTR+WV V
Sbjct: 296 LPQTLPVRLRRRTRWWVHV 314