Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 342 a.a., spermidine/putrescine ABC transporter ATPase from Pseudomonas simiae WCS417

 Score =  269 bits (687), Expect = 9e-77
 Identities = 148/314 (47%), Positives = 200/314 (63%), Gaps = 18/314 (5%)

Query: 1   MPALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRI 60
           M  L L+ L KRY    A  +  L+V  GEF+SLLGPSGCGKTT L+M+AG ++ +GG+I
Sbjct: 1   MAFLQLNALSKRYGAVDAVVATDLAVEKGEFVSLLGPSGCGKTTTLQMIAGFVDVSGGQI 60

Query: 61  LVDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALAS 120
           L+DGRDIT      R +G+VFQSYALFPHMSV +NVAFGL+ + +  +E+  +V   L  
Sbjct: 61  LLDGRDITHAKPASRGLGVVFQSYALFPHMSVRDNVAFGLKMRKVPAAEIASKVKTVLEL 120

Query: 121 VRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQ 180
           VRL+   DR P++LSGGQ+QRVA+AR++   P +LL DEPLSNLDA+LR+EMQ E++R+Q
Sbjct: 121 VRLAPHADRYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDANLREEMQFEIRRIQ 180

Query: 181 REVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRL 240
             VGITTL VTHDQ EA+S+SDRV V+  G V Q D P  +Y  P T F++ F+G+ N L
Sbjct: 181 CAVGITTLMVTHDQAEALSISDRVVVMQAGRVTQIDAPYKLYEHPRTRFISDFVGKANLL 240

Query: 241 TGRVVRANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDIRFADAPSPGAATLAG 300
            G             L   P +   + +G      + + +R E I+  DA   G+  L G
Sbjct: 241 PG----------DYDLLGSPQVRHESGDG-----ELTLSLRPEKIQLVDA---GSGRLQG 282

Query: 301 RVAMRSFVGARVQY 314
           +V    F G++  Y
Sbjct: 283 KVLDSYFFGSQWLY 296