Pairwise Alignments

Query, 363 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 346 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  252 bits (643), Expect = 1e-71
 Identities = 153/348 (43%), Positives = 208/348 (59%), Gaps = 22/348 (6%)

Query: 1   MPALTLDRLEKRYPGHVAASSVSLSVHDGEFISLLGPSGCGKTTVLRMVAGLIEPTGGRI 60
           M  L +  + K Y    A   VS++V  GEF+++LGPSGCGK+T+LR++ G+ +P+GG I
Sbjct: 1   MSELEISNISKDYGASRALHPVSITVERGEFVTILGPSGCGKSTLLRILTGISQPSGGEI 60

Query: 61  LVDGRDITALPTNRRNIGLVFQSYALFPHMSVFENVAFGLRRQGMQGSELKQRVDQALAS 120
            + G+ I       R+I +VFQSYALFPHMSV +N+ FGL+ + +   E  +R+  AL  
Sbjct: 61  RLGGKRIDQAQPEARDIAMVFQSYALFPHMSVAKNLGFGLKMKKVAKDERARRIAHALEI 120

Query: 121 VRLSALGDRMPKQLSGGQQQRVAVARSIAPRPSILLFDEPLSNLDASLRDEMQIELKRLQ 180
             L+ L DRMP+QLSGGQQQRVA+AR+I  +PS+LLFDEPLSNLDA LRD ++ EL  L 
Sbjct: 121 CNLTGLVDRMPRQLSGGQQQRVALARAIVMQPSLLLFDEPLSNLDAKLRDTLRHELTELH 180

Query: 181 REVGITTLFVTHDQGEAMSMSDRVCVLAHGVVQQFDTPEAIYHRPATGFVASFIGRPNRL 240
           R +G T+L+VTHDQ EAM+MSDR+ V+  G V +  TP  +Y  P   F A F+G+ N L
Sbjct: 181 RRIGATSLYVTHDQAEAMAMSDRIVVMNAGRVVEIGTPLELYRAPKHAFTAGFLGQTNLL 240

Query: 241 TGRVVRANGASAAVQLDDGPMLPASAAEGMVQGAAVDVVIRQEDIRFADAPSPGAATLAG 300
               V A G  A +       L  +AA G VQ +A     R E+I    A   G     G
Sbjct: 241 P---VSAEGQQAQLPWGQSVTLDQAAA-GNVQISA-----RPENIHIC-ADQAG----DG 286

Query: 301 RVAMRSFVGARVQYLLAFGGTELIAEAVTNGPHAGLE--VDAPVRVAI 346
            V+  SF+GA   Y +  GG ++          +G E  +DA  RVA+
Sbjct: 287 TVSAVSFMGANALYTVEIGGRQIRVS------QSGAETLIDAGQRVAL 328