Pairwise Alignments

Query, 283 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

Subject, 306 a.a., spermidine/putrescine ABC transporter - inner membrane subunit from Pseudomonas putida KT2440

 Score =  157 bits (398), Expect = 2e-43
 Identities = 80/262 (30%), Positives = 146/262 (55%), Gaps = 2/262 (0%)

Query: 14  PLLLLLLLAFVAPVLLMVPLS-LHPYEPGTGISAGWTLANYTSIVTDEYYREVVVRTLVL 72
           P  ++L ++F    + + P + ++ Y     I     LANY  +  DE Y    + +L +
Sbjct: 36  PFFIVLKISFAEADVAIPPYTEIYTYVEDK-IQLVLNLANYGLLTEDELYLSAYLGSLKM 94

Query: 73  GFGVTAICLLLGYPLAYYIANAGPRMRLALTMLVIFPMLLNLVVRSFGWIALLANRGLVN 132
            F  T +CLL+G+P+AY IANA    +  L +L++ P    +++R + W+ +L+N GL+N
Sbjct: 95  AFFSTLLCLLIGFPMAYAIANAKKETQTVLLLLIMMPTWTAILIRVYAWMGILSNNGLLN 154

Query: 133 NLLIDIGLIERPIKMMFNLFGLLVGMSHIFLPFMVLMLVPAIQAISKDVQAAAYTLAASR 192
             L+  GLI++P++++     + +G+ + +LPFM+L L   +      +  AA  L +S 
Sbjct: 155 GFLLWTGLIDQPLQILNTNLAVYIGVVYSYLPFMILPLFANLVKHDPSLLEAASDLGSST 214

Query: 193 LRVFWSITLPMSAPGILSGSILVFVLTISALVTPRMLGGPTYKVMATLIYDDFLQTLDWP 252
              FW IT+P+S  GI++G +LVF+  +   V P +LGGP   ++  +++ +F    DWP
Sbjct: 215 FNSFWKITVPLSKNGIIAGCMLVFIPVVGEFVIPELLGGPETLMIGKVLWQEFFNNRDWP 274

Query: 253 AGAAMSFALTALTLAVIGLSSR 274
             +A++  + A+ +  I L +R
Sbjct: 275 VASALAVVMLAILIVPILLFNR 296