Pairwise Alignments

Query, 263 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Variovorax sp. SCN45

Subject, 274 a.a., polyamine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  172 bits (437), Expect = 5e-48
 Identities = 87/239 (36%), Positives = 147/239 (61%), Gaps = 1/239 (0%)

Query: 18  VVVFLQIPVLVVVLAAFSKTAYLTIPPKGLTFHWFEVVLRDPEYLGAAWTSLWLAAASTA 77
           +++FL +PVLV++  +F+  ++L  P +G + HW++      E++ A   S+ +A A+T 
Sbjct: 24  ILLFLILPVLVIIPLSFNSGSFLVYPLQGFSLHWYQDFFASAEWMRALKNSVIVAPAATV 83

Query: 78  AALVLGLIAAYAIHRRMVPGAAALTSLFMAPLILPSVVLGVALLQYYTMTGLRGNSLGLW 137
            A+V G +AA  + R   PG A + +L ++P+++P V++GVA   ++   GL  +   L 
Sbjct: 84  LAMVFGTLAAIGLTRGNFPGKALVMALVISPMVVPVVIIGVASYLFFAPLGLGNSFFSLI 143

Query: 138 LAHVVITVPYVVRASLGSLSSVDESLEDAARVLGADGFTSFRLVTLPLVKPGLVAGGLFA 197
           + H V+ VP+V+     +L   + +L  AA  LGA   T+FR VTLPL+ PG+++G LFA
Sbjct: 144 VVHAVLGVPFVIITVSATLQGFNHNLVRAAASLGASPLTAFRRVTLPLIAPGVISGALFA 203

Query: 198 FITSLDNVPVSVFLLSASQTTLPVKIFTSVEQGVDPSVAAVSTLLIVTTGIVLLLAERW 256
           F TS D V V++FL    Q TLP ++F+ + + + P++AA +TLLI  + ++LLL   W
Sbjct: 204 FSTSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFS-VLLLLTLEW 261



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 11/111 (9%)

Query: 17  AVVVFLQIPVLVVVLAAFSKTAYLTIPPKGLTFHWFEVVLRDPEYLGAAWTSLWLAAAST 76
           A+V+ L I  +VV +      +YL   P GL   +F +++     LG  +  + ++A  T
Sbjct: 105 ALVMALVISPMVVPVVIIGVASYLFFAPLGLGNSFFSLIVVH-AVLGVPFVIITVSA--T 161

Query: 77  AAALVLGLIAAYAIHRRMVPGAAALTSL--FMAPLILPSVVLGVALLQYYT 125
                  L+ A A       GA+ LT+      PLI P V+ G AL  + T
Sbjct: 162 LQGFNHNLVRAAA-----SLGASPLTAFRRVTLPLIAPGVISG-ALFAFST 206