Pairwise Alignments

Query, 263 a.a., Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) from Variovorax sp. SCN45

Subject, 297 a.a., spermidine/putrescine ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  132 bits (332), Expect = 8e-36
 Identities = 73/238 (30%), Positives = 137/238 (57%), Gaps = 8/238 (3%)

Query: 19  VVFLQIPVLVVVLAAFSKTAYLTIPPKGLTFHWFEVVLRDPEYLGAAWTSLWLAAASTAA 78
           ++F+ +P+L++V+ +F+ +  +T+   G +  W+  +L + + +G+   SL +A  +  A
Sbjct: 15  LLFIYLPMLILVIYSFNASKLVTVWG-GWSIKWYVGLLDNSQLMGSVMRSLEIACYTAVA 73

Query: 79  ALVLGLIAAYAIHR-RMVPGAAALTSLFMAPLILPSVVLGVALLQYYT-MTGLRG----- 131
           A+ LG +AA+ + R     G      L  APL++P V+ G++LL  +  M  + G     
Sbjct: 74  AVALGTLAAFVLTRVTRFKGRTLFGGLVTAPLVMPEVITGLSLLLLFVAMAQMIGWPQER 133

Query: 132 NSLGLWLAHVVITVPYVVRASLGSLSSVDESLEDAARVLGADGFTSFRLVTLPLVKPGLV 191
             + +W+AH      YV       L  +D S+E+AA  LGA  +  F L+T+P++ P L 
Sbjct: 134 GIVTIWIAHTTFCAAYVAVVVSARLRELDLSIEEAAMDLGAKPWKVFFLITIPMIAPSLA 193

Query: 192 AGGLFAFITSLDNVPVSVFLLSASQTTLPVKIFTSVEQGVDPSVAAVSTLLIVTTGIV 249
           AGG+ +F  SLD++ ++ F+     TTLP+++F++V  GV P + AV++L++++  +V
Sbjct: 194 AGGMMSFALSLDDLVLASFVSGPGSTTLPMEVFSAVRLGVKPEINAVASLILLSVSLV 251