Pairwise Alignments

Query, 303 a.a., Transcriptional regulator YbhD, LysR family from Variovorax sp. SCN45

Subject, 317 a.a., LysR substrate-binding domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  108 bits (271), Expect = 1e-28
 Identities = 86/314 (27%), Positives = 144/314 (45%), Gaps = 15/314 (4%)

Query: 3   IDILGIQAFVAIADEGSFQAAAGALNVTQTAITQRLRKLEEFLGVALVERTTRSVALTTI 62
           +++  +Q  VA+A+   F  AA A  V+Q  ++ +++KLE+ LGV+LVERT R V LT +
Sbjct: 1   MNLRDLQYLVALAEHRHFGRAAEACFVSQPTLSTQIKKLEDELGVSLVERTPRKVLLTEV 60

Query: 63  GRDFVPRARRLLVELADSLLEIRETGKAERGDVSIACVPTAGVQFLPRIMKAYSAKHPHN 122
           GRD   RAR +L E+       R T   E G V +   PT G   LP  +       P  
Sbjct: 61  GRDIATRARDVLNEIEQIRGVARRTLDPESGTVRLGIFPTLGPYLLPHALPLVREAFPRL 120

Query: 123 RIKILDHSSAAVANAVLHREVEFGIGMVGAHSPELQSVPLIEDEYVLICHEAHPLAQRK- 181
            + +++  +  V   +   +++ GI  +  H   L S  L E+ ++L   +AHPLAQ + 
Sbjct: 121 ELLLVEEKTEVVLRMLREGKLDAGILALPLHEDSLHSEFLFEEPFLLAVSDAHPLAQHQG 180

Query: 182 RIAWRQLEPHPLIFA--GHASENRPLLDLALGAASASLQAFYEVQRSSTAVGLVAERVAA 239
           ++    L    L+    GH   ++ L    L    A   + +      T   +VA  V  
Sbjct: 181 QLKLGDLSSQNLLLLEDGHCLRDQALEVCHL--TGAGEHSGFRATSLETLRQMVAANVGI 238

Query: 240 AVVPRLALQKGAYP--TLRIVELTEPKVSRTLVLMTRKTARLSPAAQAL--------YDL 289
            ++P  A++    P   L ++E      SR + ++ RK++ +    + L         DL
Sbjct: 239 TLLPVTAVKPPVAPVENLHLIEFRGHPPSRRIAMVWRKSSAMDGFLRRLADVFRQLPADL 298

Query: 290 IEAQASVAPAARRR 303
           ++A  +  PA   R
Sbjct: 299 LDAHTATTPAPAPR 312