Pairwise Alignments

Query, 200 a.a., Intracellular protease from Variovorax sp. SCN45

Subject, 325 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Variovorax sp. SCN45

 Score = 47.4 bits (111), Expect = 3e-10
 Identities = 50/180 (27%), Positives = 69/180 (38%), Gaps = 10/180 (5%)

Query: 3   IAILTFDGFNELDSLIALGVLNRIKK----PGWRVTLCCPTPEVTSMN-GVTVRAQSLLE 57
           IA++ FDG +     +   V    +     P +R+ +C P P     N G T+  +  LE
Sbjct: 9   IAVVAFDGISPFHLSVPCMVFGEDRTETGAPRFRLRVCAPEPGALRTNAGFTLGVEHGLE 68

Query: 58  EARSAEAVVVGSGVRTREVVESPELMERLAMDPGR-QLIAAQCSGTLILARLGLLGSVPA 116
             R A  VVV S  R       P L+  L     R   +   C G  +LA  GLL   PA
Sbjct: 69  AIRHARIVVVPSW-RDDCAAAPPALIRALQAAHRRGATVVGLCLGAFVLAEAGLLDGRPA 127

Query: 117 CTDLTTKPWVQAAGVEVLNQP---FFASGNVATAGGCFASPYLAAWIIARSEGREAAEAA 173
            T     P       +V  QP   +   G+V T+ G  A       ++    G E A  A
Sbjct: 128 TTHWKLAPAFARQYPKVRLQPEVLYVDDGSVLTSAGTAAGIDCCLHLLRVRHGAETANRA 187