Pairwise Alignments

Query, 190 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 170 a.a., RNA polymerase subunit sigma-24 from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 2e-14
 Identities = 43/150 (28%), Positives = 76/150 (50%), Gaps = 3/150 (2%)

Query: 10  FVSEVLPMEAALTRFLRRNWRDEAEVPDLRQDVYVRIYESAAKAVPELVKPFVFTTARNL 69
           F S  L     L R L+R   + +   DL Q+ Y+R+  +  +   E ++PFVF TARNL
Sbjct: 6   FNSVFLVQRLTLLRTLQRMVGNPSTAEDLLQETYLRVSRALGERPIEHIEPFVFQTARNL 65

Query: 70  LID--RARRAQI-VSIEIIADLDALDFSADELTPERHAAGRGELRLLQTALDALPPKCRR 126
            +D  RARR Q  + ++ + D      +A   + E  A     L+ L  +L+ L  + +R
Sbjct: 66  ALDHLRARRVQARMLVDDVPDEVLHSVAAPATSSEDAAHAEQLLKHLSVSLNQLSERQQR 125

Query: 127 VVELRKIDGLPQRDVAILLGITEDTVERQV 156
           +  L ++ G    ++A  L ++  TV++++
Sbjct: 126 IFILSRLHGATYLEIAEQLSVSPSTVQKEL 155