Pairwise Alignments

Query, 190 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

 Score = 55.1 bits (131), Expect = 6e-13
 Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 5/140 (3%)

Query: 27  RNWRDEAEVPDLRQDVYVRIYESAAKAVPELVKPFVFTTARNLLIDRARRA-QIVSIEII 85
           R  R   +  DL  D +VR+ E+  + V E  + ++   ARN+ +D  RR  +  ++E  
Sbjct: 20  RKLRSRQQAEDLTHDAFVRVLETPREQV-EQPRAYLHQAARNIAVDGFRREDRRQALERE 78

Query: 86  ADLDALDFSADELTPERHAAGRGELRLLQTALDALPPKCRRVVELRKIDGLPQRDVAILL 145
           A  +    S D   PE +         ++ AL  LP  CR+V   +K++GL Q ++A  +
Sbjct: 79  AFEEGATGSGD---PEAYVHALELADSVERALAELPLNCRQVFIWQKLEGLTQAEIAERM 135

Query: 146 GITEDTVERQVSRGVRALAD 165
           G++++ VE+ + R +R L +
Sbjct: 136 GLSKNMVEKYMIRTLRHLRE 155